Protein–RNA interactions for Protein: Q91VH2

Snx9, Sorting nexin-9, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx9Q91VH2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx9Q91VH2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx9Q91VH2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx9Q91VH2 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.55■□□□□ 0.4
Snx9Q91VH2 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Snx9Q91VH2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx9Q91VH2 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Snx9Q91VH2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx9Q91VH2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx9Q91VH2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx9Q91VH2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx9Q91VH2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx9Q91VH2 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx9Q91VH2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx9Q91VH2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx9Q91VH2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.54■□□□□ 0.4
Snx9Q91VH2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx9Q91VH2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.54■□□□□ 0.4
Snx9Q91VH2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.54■□□□□ 0.4
Snx9Q91VH2 Gm29518-201ENSMUST00000190858 372 ntBASIC17.54■□□□□ 0.4
Snx9Q91VH2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.54■□□□□ 0.4
Snx9Q91VH2 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Snx9Q91VH2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx9Q91VH2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx9Q91VH2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx9Q91VH2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Snx9Q91VH2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx9Q91VH2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.54■□□□□ 0.4
Snx9Q91VH2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Snx9Q91VH2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.54■□□□□ 0.4
Snx9Q91VH2 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx9Q91VH2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx9Q91VH2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Snx9Q91VH2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Snx9Q91VH2 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx9Q91VH2 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Snx9Q91VH2 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Snx9Q91VH2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx9Q91VH2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx9Q91VH2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.53■□□□□ 0.4
Snx9Q91VH2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx9Q91VH2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx9Q91VH2 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx9Q91VH2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Snx9Q91VH2 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Snx9Q91VH2 Gm6623-201ENSMUST00000173570 544 ntBASIC17.53■□□□□ 0.4
Snx9Q91VH2 Gm17808-201ENSMUST00000200859 894 ntBASIC17.53■□□□□ 0.4
Snx9Q91VH2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.53■□□□□ 0.4
Snx9Q91VH2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx9Q91VH2 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Snx9Q91VH2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx9Q91VH2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx9Q91VH2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx9Q91VH2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx9Q91VH2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.53■□□□□ 0.4
Snx9Q91VH2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx9Q91VH2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx9Q91VH2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Snx9Q91VH2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Snx9Q91VH2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Snx9Q91VH2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Snx9Q91VH2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Snx9Q91VH2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Snx9Q91VH2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Snx9Q91VH2 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Snx9Q91VH2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Snx9Q91VH2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Snx9Q91VH2 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Snx9Q91VH2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Snx9Q91VH2 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Snx9Q91VH2 Mir770-201ENSMUST00000103252 94 ntBASIC17.52■□□□□ 0.4
Snx9Q91VH2 Gm21362-201ENSMUST00000194272 928 ntBASIC17.52■□□□□ 0.4
Snx9Q91VH2 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.52■□□□□ 0.4
Snx9Q91VH2 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Snx9Q91VH2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Snx9Q91VH2 Gm7367-201ENSMUST00000057611 492 ntBASIC17.52■□□□□ 0.4
Snx9Q91VH2 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Snx9Q91VH2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Snx9Q91VH2 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.52■□□□□ 0.4
Snx9Q91VH2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Snx9Q91VH2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Snx9Q91VH2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Snx9Q91VH2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Snx9Q91VH2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Snx9Q91VH2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Snx9Q91VH2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Snx9Q91VH2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Snx9Q91VH2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Snx9Q91VH2 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Snx9Q91VH2 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.51■□□□□ 0.39
Snx9Q91VH2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Snx9Q91VH2 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx9Q91VH2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx9Q91VH2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx9Q91VH2 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Snx9Q91VH2 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.51■□□□□ 0.39
Snx9Q91VH2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Snx9Q91VH2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx9Q91VH2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Snx9Q91VH2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms