Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Vsx1Q91V10 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
Vsx1Q91V10 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.47■□□□□ 0.23
Vsx1Q91V10 Gm5364-201ENSMUST00000216789 889 ntBASIC16.47■□□□□ 0.23
Vsx1Q91V10 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vsx1Q91V10 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vsx1Q91V10 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vsx1Q91V10 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vsx1Q91V10 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Vsx1Q91V10 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vsx1Q91V10 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vsx1Q91V10 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Vsx1Q91V10 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vsx1Q91V10 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vsx1Q91V10 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vsx1Q91V10 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vsx1Q91V10 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vsx1Q91V10 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Vsx1Q91V10 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vsx1Q91V10 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.46■□□□□ 0.23
Vsx1Q91V10 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.46■□□□□ 0.23
Vsx1Q91V10 Gm12350-201ENSMUST00000121208 462 ntBASIC16.46■□□□□ 0.23
Vsx1Q91V10 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.46■□□□□ 0.23
Vsx1Q91V10 Gm27702-201ENSMUST00000184512 56 ntBASIC16.46■□□□□ 0.23
Vsx1Q91V10 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.46■□□□□ 0.23
Vsx1Q91V10 Gm44357-201ENSMUST00000195897 142 ntBASIC16.46■□□□□ 0.23
Vsx1Q91V10 Gm19658-201ENSMUST00000196231 138 ntBASIC16.46■□□□□ 0.23
Vsx1Q91V10 Gm44367-201ENSMUST00000196836 138 ntBASIC16.46■□□□□ 0.23
Vsx1Q91V10 Gm44350-201ENSMUST00000197197 138 ntBASIC16.46■□□□□ 0.23
Vsx1Q91V10 Gm44390-201ENSMUST00000197533 144 ntBASIC16.46■□□□□ 0.23
Vsx1Q91V10 Gm44313-201ENSMUST00000198018 138 ntBASIC16.46■□□□□ 0.23
Vsx1Q91V10 Gm44486-201ENSMUST00000198508 138 ntBASIC16.46■□□□□ 0.23
Vsx1Q91V10 Gm44454-201ENSMUST00000198541 138 ntBASIC16.46■□□□□ 0.23
Vsx1Q91V10 Gm44314-201ENSMUST00000199263 138 ntBASIC16.46■□□□□ 0.23
Vsx1Q91V10 Gm44394-201ENSMUST00000199558 138 ntBASIC16.46■□□□□ 0.23
Vsx1Q91V10 Gm44484-201ENSMUST00000199873 138 ntBASIC16.46■□□□□ 0.23
Vsx1Q91V10 Gm44466-201ENSMUST00000200264 138 ntBASIC16.46■□□□□ 0.23
Vsx1Q91V10 Gm44359-201ENSMUST00000200671 138 ntBASIC16.46■□□□□ 0.23
Vsx1Q91V10 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vsx1Q91V10 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vsx1Q91V10 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vsx1Q91V10 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Vsx1Q91V10 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Vsx1Q91V10 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Vsx1Q91V10 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.46■□□□□ 0.23
Vsx1Q91V10 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vsx1Q91V10 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.46■□□□□ 0.23
Vsx1Q91V10 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Vsx1Q91V10 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Vsx1Q91V10 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Vsx1Q91V10 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
Vsx1Q91V10 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Vsx1Q91V10 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Vsx1Q91V10 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vsx1Q91V10 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Vsx1Q91V10 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vsx1Q91V10 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vsx1Q91V10 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Vsx1Q91V10 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vsx1Q91V10 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vsx1Q91V10 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Vsx1Q91V10 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Vsx1Q91V10 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vsx1Q91V10 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vsx1Q91V10 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vsx1Q91V10 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.45■□□□□ 0.22
Vsx1Q91V10 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vsx1Q91V10 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vsx1Q91V10 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vsx1Q91V10 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vsx1Q91V10 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vsx1Q91V10 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vsx1Q91V10 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Vsx1Q91V10 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vsx1Q91V10 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vsx1Q91V10 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vsx1Q91V10 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vsx1Q91V10 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Vsx1Q91V10 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Vsx1Q91V10 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vsx1Q91V10 Gm11779-201ENSMUST00000118541 368 ntBASIC16.44■□□□□ 0.22
Vsx1Q91V10 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vsx1Q91V10 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vsx1Q91V10 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Vsx1Q91V10 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vsx1Q91V10 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vsx1Q91V10 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.44■□□□□ 0.22
Vsx1Q91V10 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vsx1Q91V10 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vsx1Q91V10 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vsx1Q91V10 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vsx1Q91V10 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.44■□□□□ 0.22
Vsx1Q91V10 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vsx1Q91V10 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vsx1Q91V10 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vsx1Q91V10 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Vsx1Q91V10 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vsx1Q91V10 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vsx1Q91V10 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.43■□□□□ 0.22
Vsx1Q91V10 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms