Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb11Q91UZ8 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb11Q91UZ8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.09■□□□□ 0.33
Pcdhb11Q91UZ8 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb11Q91UZ8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb11Q91UZ8 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb11Q91UZ8 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb11Q91UZ8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb11Q91UZ8 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.09■□□□□ 0.33
Pcdhb11Q91UZ8 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Pcdhb11Q91UZ8 Phf7-203ENSMUST00000226565 1971 ntBASIC17.09■□□□□ 0.33
Pcdhb11Q91UZ8 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb11Q91UZ8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb11Q91UZ8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb11Q91UZ8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb11Q91UZ8 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb11Q91UZ8 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.08■□□□□ 0.33
Pcdhb11Q91UZ8 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb11Q91UZ8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.08■□□□□ 0.33
Pcdhb11Q91UZ8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb11Q91UZ8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb11Q91UZ8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb11Q91UZ8 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb11Q91UZ8 Gm13836-201ENSMUST00000121159 501 ntBASIC17.08■□□□□ 0.32
Pcdhb11Q91UZ8 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.08■□□□□ 0.32
Pcdhb11Q91UZ8 Gm26039-201ENSMUST00000158152 144 ntBASIC17.08■□□□□ 0.32
Pcdhb11Q91UZ8 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb11Q91UZ8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb11Q91UZ8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb11Q91UZ8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Pcdhb11Q91UZ8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.08■□□□□ 0.32
Pcdhb11Q91UZ8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb11Q91UZ8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb11Q91UZ8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb11Q91UZ8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb11Q91UZ8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb11Q91UZ8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhb11Q91UZ8 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.07■□□□□ 0.32
Pcdhb11Q91UZ8 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhb11Q91UZ8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb11Q91UZ8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb11Q91UZ8 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhb11Q91UZ8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb11Q91UZ8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb11Q91UZ8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb11Q91UZ8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb11Q91UZ8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.07■□□□□ 0.32
Pcdhb11Q91UZ8 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdhb11Q91UZ8 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdhb11Q91UZ8 Gm18101-201ENSMUST00000215769 548 ntBASIC17.07■□□□□ 0.32
Pcdhb11Q91UZ8 Gm21559-201ENSMUST00000220638 855 ntBASIC17.07■□□□□ 0.32
Pcdhb11Q91UZ8 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb11Q91UZ8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb11Q91UZ8 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb11Q91UZ8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb11Q91UZ8 Gm8587-201ENSMUST00000076538 843 ntBASIC17.07■□□□□ 0.32
Pcdhb11Q91UZ8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb11Q91UZ8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb11Q91UZ8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb11Q91UZ8 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb11Q91UZ8 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb11Q91UZ8 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb11Q91UZ8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb11Q91UZ8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb11Q91UZ8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb11Q91UZ8 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb11Q91UZ8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb11Q91UZ8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb11Q91UZ8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb11Q91UZ8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb11Q91UZ8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Pcdhb11Q91UZ8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb11Q91UZ8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.06■□□□□ 0.32
Pcdhb11Q91UZ8 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.06■□□□□ 0.32
Pcdhb11Q91UZ8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb11Q91UZ8 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb11Q91UZ8 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb11Q91UZ8 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb11Q91UZ8 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb11Q91UZ8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb11Q91UZ8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb11Q91UZ8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb11Q91UZ8 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb11Q91UZ8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pcdhb11Q91UZ8 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb11Q91UZ8 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Pcdhb11Q91UZ8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb11Q91UZ8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pcdhb11Q91UZ8 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.05■□□□□ 0.32
Pcdhb11Q91UZ8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pcdhb11Q91UZ8 Gm18115-201ENSMUST00000221209 621 ntBASIC17.05■□□□□ 0.32
Pcdhb11Q91UZ8 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pcdhb11Q91UZ8 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Pcdhb11Q91UZ8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.05■□□□□ 0.32
Pcdhb11Q91UZ8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb11Q91UZ8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb11Q91UZ8 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb11Q91UZ8 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb11Q91UZ8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb11Q91UZ8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms