Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H1fooQ8VIK3 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H1fooQ8VIK3 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H1fooQ8VIK3 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H1fooQ8VIK3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
H1fooQ8VIK3 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC13.97□□□□□ -0.17
H1fooQ8VIK3 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.97□□□□□ -0.17
H1fooQ8VIK3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H1fooQ8VIK3 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
H1fooQ8VIK3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
H1fooQ8VIK3 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
H1fooQ8VIK3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
H1fooQ8VIK3 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H1fooQ8VIK3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
H1fooQ8VIK3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H1fooQ8VIK3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
H1fooQ8VIK3 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.96□□□□□ -0.17
H1fooQ8VIK3 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H1fooQ8VIK3 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
H1fooQ8VIK3 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
H1fooQ8VIK3 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H1fooQ8VIK3 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
H1fooQ8VIK3 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
H1fooQ8VIK3 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H1fooQ8VIK3 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H1fooQ8VIK3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H1fooQ8VIK3 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H1fooQ8VIK3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H1fooQ8VIK3 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H1fooQ8VIK3 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
H1fooQ8VIK3 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.96□□□□□ -0.17
H1fooQ8VIK3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC13.96□□□□□ -0.17
H1fooQ8VIK3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H1fooQ8VIK3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
H1fooQ8VIK3 Mir5122-201ENSMUST00000175004 89 ntBASIC13.96□□□□□ -0.17
H1fooQ8VIK3 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.96□□□□□ -0.17
H1fooQ8VIK3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H1fooQ8VIK3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
H1fooQ8VIK3 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H1fooQ8VIK3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
H1fooQ8VIK3 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
H1fooQ8VIK3 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
H1fooQ8VIK3 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
H1fooQ8VIK3 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
H1fooQ8VIK3 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
H1fooQ8VIK3 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
H1fooQ8VIK3 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
H1fooQ8VIK3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
H1fooQ8VIK3 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
H1fooQ8VIK3 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
H1fooQ8VIK3 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.95□□□□□ -0.18
H1fooQ8VIK3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.95□□□□□ -0.18
H1fooQ8VIK3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
H1fooQ8VIK3 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
H1fooQ8VIK3 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
H1fooQ8VIK3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
H1fooQ8VIK3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
H1fooQ8VIK3 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
H1fooQ8VIK3 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.95□□□□□ -0.18
H1fooQ8VIK3 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
H1fooQ8VIK3 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
H1fooQ8VIK3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
H1fooQ8VIK3 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H1fooQ8VIK3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
H1fooQ8VIK3 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H1fooQ8VIK3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
H1fooQ8VIK3 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H1fooQ8VIK3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H1fooQ8VIK3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
H1fooQ8VIK3 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
H1fooQ8VIK3 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H1fooQ8VIK3 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC13.94□□□□□ -0.18
H1fooQ8VIK3 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
H1fooQ8VIK3 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC13.94□□□□□ -0.18
H1fooQ8VIK3 Gm27463-201ENSMUST00000183569 57 ntBASIC13.94□□□□□ -0.18
H1fooQ8VIK3 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
H1fooQ8VIK3 Gm21814-202ENSMUST00000203277 873 ntBASIC13.94□□□□□ -0.18
H1fooQ8VIK3 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
H1fooQ8VIK3 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC13.94□□□□□ -0.18
H1fooQ8VIK3 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H1fooQ8VIK3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
H1fooQ8VIK3 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H1fooQ8VIK3 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H1fooQ8VIK3 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H1fooQ8VIK3 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.94□□□□□ -0.18
H1fooQ8VIK3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.94□□□□□ -0.18
H1fooQ8VIK3 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H1fooQ8VIK3 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H1fooQ8VIK3 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H1fooQ8VIK3 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.94□□□□□ -0.18
H1fooQ8VIK3 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H1fooQ8VIK3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H1fooQ8VIK3 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
H1fooQ8VIK3 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
H1fooQ8VIK3 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
H1fooQ8VIK3 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.93□□□□□ -0.18
H1fooQ8VIK3 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
H1fooQ8VIK3 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H1fooQ8VIK3 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
H1fooQ8VIK3 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms