Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cspg4Q8VHY0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg4Q8VHY0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg4Q8VHY0 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cspg4Q8VHY0 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.32□□□□□ -0.12
Cspg4Q8VHY0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg4Q8VHY0 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg4Q8VHY0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg4Q8VHY0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cspg4Q8VHY0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cspg4Q8VHY0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cspg4Q8VHY0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cspg4Q8VHY0 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cspg4Q8VHY0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cspg4Q8VHY0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
Cspg4Q8VHY0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cspg4Q8VHY0 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cspg4Q8VHY0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cspg4Q8VHY0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cspg4Q8VHY0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cspg4Q8VHY0 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.31□□□□□ -0.12
Cspg4Q8VHY0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cspg4Q8VHY0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cspg4Q8VHY0 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.31□□□□□ -0.12
Cspg4Q8VHY0 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cspg4Q8VHY0 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.31□□□□□ -0.12
Cspg4Q8VHY0 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cspg4Q8VHY0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.31□□□□□ -0.12
Cspg4Q8VHY0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Cspg4Q8VHY0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.31□□□□□ -0.12
Cspg4Q8VHY0 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cspg4Q8VHY0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cspg4Q8VHY0 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.31□□□□□ -0.12
Cspg4Q8VHY0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cspg4Q8VHY0 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cspg4Q8VHY0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cspg4Q8VHY0 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.3□□□□□ -0.12
Cspg4Q8VHY0 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cspg4Q8VHY0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cspg4Q8VHY0 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cspg4Q8VHY0 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.3□□□□□ -0.12
Cspg4Q8VHY0 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cspg4Q8VHY0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cspg4Q8VHY0 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cspg4Q8VHY0 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cspg4Q8VHY0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cspg4Q8VHY0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cspg4Q8VHY0 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.3□□□□□ -0.12
Cspg4Q8VHY0 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cspg4Q8VHY0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cspg4Q8VHY0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cspg4Q8VHY0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cspg4Q8VHY0 Mir3113-201ENSMUST00000175478 76 ntBASIC14.3□□□□□ -0.12
Cspg4Q8VHY0 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.3□□□□□ -0.12
Cspg4Q8VHY0 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.3□□□□□ -0.12
Cspg4Q8VHY0 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cspg4Q8VHY0 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cspg4Q8VHY0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
Cspg4Q8VHY0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Cspg4Q8VHY0 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cspg4Q8VHY0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Cspg4Q8VHY0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.29□□□□□ -0.12
Cspg4Q8VHY0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cspg4Q8VHY0 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.29□□□□□ -0.12
Cspg4Q8VHY0 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cspg4Q8VHY0 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cspg4Q8VHY0 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cspg4Q8VHY0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cspg4Q8VHY0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cspg4Q8VHY0 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cspg4Q8VHY0 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cspg4Q8VHY0 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cspg4Q8VHY0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cspg4Q8VHY0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cspg4Q8VHY0 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cspg4Q8VHY0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cspg4Q8VHY0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cspg4Q8VHY0 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.28□□□□□ -0.12
Cspg4Q8VHY0 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cspg4Q8VHY0 Gm6550-201ENSMUST00000187574 993 ntBASIC14.28□□□□□ -0.12
Cspg4Q8VHY0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cspg4Q8VHY0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Cspg4Q8VHY0 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cspg4Q8VHY0 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cspg4Q8VHY0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cspg4Q8VHY0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cspg4Q8VHY0 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cspg4Q8VHY0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cspg4Q8VHY0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.28□□□□□ -0.12
Cspg4Q8VHY0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cspg4Q8VHY0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cspg4Q8VHY0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cspg4Q8VHY0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cspg4Q8VHY0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.27□□□□□ -0.12
Cspg4Q8VHY0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cspg4Q8VHY0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Cspg4Q8VHY0 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cspg4Q8VHY0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Cspg4Q8VHY0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cspg4Q8VHY0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms