Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.85■□□□□ 0.29
Rpa1Q8VEE4 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.85■□□□□ 0.29
Rpa1Q8VEE4 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpa1Q8VEE4 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpa1Q8VEE4 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Rpa1Q8VEE4 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpa1Q8VEE4 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpa1Q8VEE4 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rpa1Q8VEE4 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpa1Q8VEE4 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpa1Q8VEE4 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpa1Q8VEE4 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.84■□□□□ 0.29
Rpa1Q8VEE4 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Rpa1Q8VEE4 Gm6576-201ENSMUST00000169678 883 ntBASIC16.84■□□□□ 0.29
Rpa1Q8VEE4 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC16.84■□□□□ 0.29
Rpa1Q8VEE4 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rpa1Q8VEE4 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.84■□□□□ 0.29
Rpa1Q8VEE4 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpa1Q8VEE4 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Rpa1Q8VEE4 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.84■□□□□ 0.29
Rpa1Q8VEE4 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpa1Q8VEE4 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rpa1Q8VEE4 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.84■□□□□ 0.29
Rpa1Q8VEE4 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.84■□□□□ 0.29
Rpa1Q8VEE4 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpa1Q8VEE4 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
Rpa1Q8VEE4 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpa1Q8VEE4 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rpa1Q8VEE4 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rpa1Q8VEE4 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
Rpa1Q8VEE4 Gm7290-201ENSMUST00000104990 617 ntBASIC16.83■□□□□ 0.28
Rpa1Q8VEE4 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rpa1Q8VEE4 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpa1Q8VEE4 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpa1Q8VEE4 Gm12918-201ENSMUST00000120234 636 ntBASIC16.83■□□□□ 0.28
Rpa1Q8VEE4 Gm15710-201ENSMUST00000121821 636 ntBASIC16.83■□□□□ 0.28
Rpa1Q8VEE4 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rpa1Q8VEE4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rpa1Q8VEE4 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpa1Q8VEE4 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.83■□□□□ 0.28
Rpa1Q8VEE4 Mir6349-201ENSMUST00000184059 97 ntBASIC16.83■□□□□ 0.28
Rpa1Q8VEE4 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.83■□□□□ 0.28
Rpa1Q8VEE4 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpa1Q8VEE4 Gm5075-201ENSMUST00000196916 622 ntBASIC16.83■□□□□ 0.28
Rpa1Q8VEE4 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Rpa1Q8VEE4 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.83■□□□□ 0.28
Rpa1Q8VEE4 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpa1Q8VEE4 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Rpa1Q8VEE4 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpa1Q8VEE4 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpa1Q8VEE4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Rpa1Q8VEE4 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Rpa1Q8VEE4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.83■□□□□ 0.28
Rpa1Q8VEE4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.83■□□□□ 0.28
Rpa1Q8VEE4 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpa1Q8VEE4 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpa1Q8VEE4 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpa1Q8VEE4 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpa1Q8VEE4 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpa1Q8VEE4 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rpa1Q8VEE4 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpa1Q8VEE4 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpa1Q8VEE4 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpa1Q8VEE4 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpa1Q8VEE4 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rpa1Q8VEE4 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpa1Q8VEE4 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Rpa1Q8VEE4 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.82■□□□□ 0.28
Rpa1Q8VEE4 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Rpa1Q8VEE4 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Rpa1Q8VEE4 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpa1Q8VEE4 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpa1Q8VEE4 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Rpa1Q8VEE4 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rpa1Q8VEE4 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rpa1Q8VEE4 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rpa1Q8VEE4 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpa1Q8VEE4 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpa1Q8VEE4 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Rpa1Q8VEE4 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpa1Q8VEE4 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rpa1Q8VEE4 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rpa1Q8VEE4 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.81■□□□□ 0.28
Rpa1Q8VEE4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpa1Q8VEE4 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpa1Q8VEE4 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpa1Q8VEE4 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpa1Q8VEE4 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpa1Q8VEE4 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.81■□□□□ 0.28
Rpa1Q8VEE4 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpa1Q8VEE4 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rpa1Q8VEE4 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpa1Q8VEE4 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpa1Q8VEE4 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpa1Q8VEE4 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Rpa1Q8VEE4 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpa1Q8VEE4 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.8■□□□□ 0.28
Rpa1Q8VEE4 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpa1Q8VEE4 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpa1Q8VEE4 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms