Protein–RNA interactions for Protein: Q8VDF2

Uhrf1, E3 ubiquitin-protein ligase UHRF1, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uhrf1Q8VDF2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
Uhrf1Q8VDF2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Uhrf1Q8VDF2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Uhrf1Q8VDF2 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.17■□□□□ 0.34
Uhrf1Q8VDF2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Uhrf1Q8VDF2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Uhrf1Q8VDF2 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.16■□□□□ 0.34
Uhrf1Q8VDF2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Uhrf1Q8VDF2 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Uhrf1Q8VDF2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.16■□□□□ 0.34
Uhrf1Q8VDF2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Uhrf1Q8VDF2 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Uhrf1Q8VDF2 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Uhrf1Q8VDF2 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Uhrf1Q8VDF2 Gm25745-201ENSMUST00000174945 133 ntBASIC17.16■□□□□ 0.34
Uhrf1Q8VDF2 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Uhrf1Q8VDF2 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Uhrf1Q8VDF2 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Uhrf1Q8VDF2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Uhrf1Q8VDF2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Uhrf1Q8VDF2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Uhrf1Q8VDF2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.16■□□□□ 0.34
Uhrf1Q8VDF2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.16■□□□□ 0.34
Uhrf1Q8VDF2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Uhrf1Q8VDF2 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Uhrf1Q8VDF2 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Uhrf1Q8VDF2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Uhrf1Q8VDF2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Uhrf1Q8VDF2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Uhrf1Q8VDF2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Uhrf1Q8VDF2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Uhrf1Q8VDF2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Uhrf1Q8VDF2 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.15■□□□□ 0.34
Uhrf1Q8VDF2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.15■□□□□ 0.34
Uhrf1Q8VDF2 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.15■□□□□ 0.34
Uhrf1Q8VDF2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.15■□□□□ 0.34
Uhrf1Q8VDF2 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Uhrf1Q8VDF2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Uhrf1Q8VDF2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Uhrf1Q8VDF2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Uhrf1Q8VDF2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Uhrf1Q8VDF2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Uhrf1Q8VDF2 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Uhrf1Q8VDF2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Uhrf1Q8VDF2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Uhrf1Q8VDF2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uhrf1Q8VDF2 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.14■□□□□ 0.33
Uhrf1Q8VDF2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Uhrf1Q8VDF2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uhrf1Q8VDF2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uhrf1Q8VDF2 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uhrf1Q8VDF2 Gm25990-201ENSMUST00000102440 86 ntBASIC17.14■□□□□ 0.33
Uhrf1Q8VDF2 Gm11779-201ENSMUST00000118541 368 ntBASIC17.14■□□□□ 0.33
Uhrf1Q8VDF2 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.14■□□□□ 0.33
Uhrf1Q8VDF2 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Uhrf1Q8VDF2 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.14■□□□□ 0.33
Uhrf1Q8VDF2 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.14■□□□□ 0.33
Uhrf1Q8VDF2 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.14■□□□□ 0.33
Uhrf1Q8VDF2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Uhrf1Q8VDF2 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uhrf1Q8VDF2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Uhrf1Q8VDF2 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uhrf1Q8VDF2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Uhrf1Q8VDF2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uhrf1Q8VDF2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uhrf1Q8VDF2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uhrf1Q8VDF2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.14■□□□□ 0.33
Uhrf1Q8VDF2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Uhrf1Q8VDF2 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uhrf1Q8VDF2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uhrf1Q8VDF2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Uhrf1Q8VDF2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uhrf1Q8VDF2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Uhrf1Q8VDF2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Uhrf1Q8VDF2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Uhrf1Q8VDF2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Uhrf1Q8VDF2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Uhrf1Q8VDF2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Uhrf1Q8VDF2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Uhrf1Q8VDF2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Uhrf1Q8VDF2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Uhrf1Q8VDF2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Uhrf1Q8VDF2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Uhrf1Q8VDF2 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Uhrf1Q8VDF2 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Uhrf1Q8VDF2 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Uhrf1Q8VDF2 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Uhrf1Q8VDF2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Uhrf1Q8VDF2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Uhrf1Q8VDF2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Uhrf1Q8VDF2 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Uhrf1Q8VDF2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Uhrf1Q8VDF2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Uhrf1Q8VDF2 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Uhrf1Q8VDF2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Uhrf1Q8VDF2 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.12■□□□□ 0.33
Uhrf1Q8VDF2 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Uhrf1Q8VDF2 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.12■□□□□ 0.33
Uhrf1Q8VDF2 Gm7230-201ENSMUST00000173026 815 ntBASIC17.12■□□□□ 0.33
Uhrf1Q8VDF2 Gm4535-201ENSMUST00000182274 558 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms