Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf8Q8VC56 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Rnf8Q8VC56 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf8Q8VC56 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf8Q8VC56 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rnf8Q8VC56 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf8Q8VC56 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf8Q8VC56 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Rnf8Q8VC56 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf8Q8VC56 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf8Q8VC56 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf8Q8VC56 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.09■□□□□ 0.17
Rnf8Q8VC56 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf8Q8VC56 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.09■□□□□ 0.17
Rnf8Q8VC56 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf8Q8VC56 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf8Q8VC56 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf8Q8VC56 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf8Q8VC56 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf8Q8VC56 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf8Q8VC56 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf8Q8VC56 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf8Q8VC56 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.09■□□□□ 0.17
Rnf8Q8VC56 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf8Q8VC56 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf8Q8VC56 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.08■□□□□ 0.17
Rnf8Q8VC56 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rnf8Q8VC56 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Rnf8Q8VC56 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf8Q8VC56 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf8Q8VC56 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf8Q8VC56 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Rnf8Q8VC56 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf8Q8VC56 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf8Q8VC56 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf8Q8VC56 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.08■□□□□ 0.16
Rnf8Q8VC56 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf8Q8VC56 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf8Q8VC56 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.08■□□□□ 0.16
Rnf8Q8VC56 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf8Q8VC56 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf8Q8VC56 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf8Q8VC56 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf8Q8VC56 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf8Q8VC56 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf8Q8VC56 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Rnf8Q8VC56 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.07■□□□□ 0.16
Rnf8Q8VC56 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.07■□□□□ 0.16
Rnf8Q8VC56 Mir5122-201ENSMUST00000175004 89 ntBASIC16.07■□□□□ 0.16
Rnf8Q8VC56 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.07■□□□□ 0.16
Rnf8Q8VC56 Gm4974-201ENSMUST00000209974 875 ntBASIC16.07■□□□□ 0.16
Rnf8Q8VC56 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.07■□□□□ 0.16
Rnf8Q8VC56 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.07■□□□□ 0.16
Rnf8Q8VC56 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Rnf8Q8VC56 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf8Q8VC56 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf8Q8VC56 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf8Q8VC56 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf8Q8VC56 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf8Q8VC56 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf8Q8VC56 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Rnf8Q8VC56 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf8Q8VC56 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf8Q8VC56 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf8Q8VC56 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf8Q8VC56 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf8Q8VC56 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf8Q8VC56 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf8Q8VC56 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf8Q8VC56 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Rnf8Q8VC56 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf8Q8VC56 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf8Q8VC56 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf8Q8VC56 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf8Q8VC56 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf8Q8VC56 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf8Q8VC56 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Rnf8Q8VC56 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf8Q8VC56 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.06■□□□□ 0.16
Rnf8Q8VC56 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.06■□□□□ 0.16
Rnf8Q8VC56 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf8Q8VC56 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf8Q8VC56 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.06■□□□□ 0.16
Rnf8Q8VC56 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.06■□□□□ 0.16
Rnf8Q8VC56 Gm21814-202ENSMUST00000203277 873 ntBASIC16.06■□□□□ 0.16
Rnf8Q8VC56 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Rnf8Q8VC56 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf8Q8VC56 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf8Q8VC56 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Rnf8Q8VC56 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf8Q8VC56 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf8Q8VC56 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.06■□□□□ 0.16
Rnf8Q8VC56 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf8Q8VC56 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf8Q8VC56 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf8Q8VC56 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf8Q8VC56 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf8Q8VC56 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.06■□□□□ 0.16
Rnf8Q8VC56 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf8Q8VC56 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms