Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.69■□□□□ 0.26
Vps39Q8R5L3 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps39Q8R5L3 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps39Q8R5L3 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vps39Q8R5L3 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Vps39Q8R5L3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.69■□□□□ 0.26
Vps39Q8R5L3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Vps39Q8R5L3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vps39Q8R5L3 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vps39Q8R5L3 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps39Q8R5L3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps39Q8R5L3 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps39Q8R5L3 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps39Q8R5L3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.69■□□□□ 0.26
Vps39Q8R5L3 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.69■□□□□ 0.26
Vps39Q8R5L3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps39Q8R5L3 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps39Q8R5L3 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps39Q8R5L3 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps39Q8R5L3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps39Q8R5L3 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Vps39Q8R5L3 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps39Q8R5L3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vps39Q8R5L3 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps39Q8R5L3 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.68■□□□□ 0.26
Vps39Q8R5L3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps39Q8R5L3 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps39Q8R5L3 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps39Q8R5L3 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vps39Q8R5L3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps39Q8R5L3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.68■□□□□ 0.26
Vps39Q8R5L3 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Vps39Q8R5L3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.68■□□□□ 0.26
Vps39Q8R5L3 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps39Q8R5L3 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.68■□□□□ 0.26
Vps39Q8R5L3 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.68■□□□□ 0.26
Vps39Q8R5L3 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps39Q8R5L3 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps39Q8R5L3 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps39Q8R5L3 Gm10812-201ENSMUST00000099864 546 ntBASIC16.68■□□□□ 0.26
Vps39Q8R5L3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Vps39Q8R5L3 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vps39Q8R5L3 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps39Q8R5L3 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Vps39Q8R5L3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps39Q8R5L3 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps39Q8R5L3 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Vps39Q8R5L3 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps39Q8R5L3 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps39Q8R5L3 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vps39Q8R5L3 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps39Q8R5L3 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps39Q8R5L3 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Vps39Q8R5L3 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Vps39Q8R5L3 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps39Q8R5L3 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps39Q8R5L3 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps39Q8R5L3 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps39Q8R5L3 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vps39Q8R5L3 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Vps39Q8R5L3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps39Q8R5L3 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Vps39Q8R5L3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps39Q8R5L3 Gm22240-201ENSMUST00000175225 82 ntBASIC16.67■□□□□ 0.26
Vps39Q8R5L3 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.67■□□□□ 0.26
Vps39Q8R5L3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps39Q8R5L3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps39Q8R5L3 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.67■□□□□ 0.26
Vps39Q8R5L3 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
Vps39Q8R5L3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps39Q8R5L3 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps39Q8R5L3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Vps39Q8R5L3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vps39Q8R5L3 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vps39Q8R5L3 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Vps39Q8R5L3 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vps39Q8R5L3 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps39Q8R5L3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vps39Q8R5L3 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps39Q8R5L3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vps39Q8R5L3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps39Q8R5L3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vps39Q8R5L3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps39Q8R5L3 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps39Q8R5L3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.66■□□□□ 0.26
Vps39Q8R5L3 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.66■□□□□ 0.26
Vps39Q8R5L3 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vps39Q8R5L3 Gm3375-201ENSMUST00000203929 796 ntBASIC16.66■□□□□ 0.26
Vps39Q8R5L3 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps39Q8R5L3 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps39Q8R5L3 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps39Q8R5L3 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps39Q8R5L3 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vps39Q8R5L3 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Vps39Q8R5L3 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vps39Q8R5L3 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Vps39Q8R5L3 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps39Q8R5L3 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps39Q8R5L3 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps39Q8R5L3 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms