Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Slf1Q8R3P9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slf1Q8R3P9 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Slf1Q8R3P9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Slf1Q8R3P9 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slf1Q8R3P9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Slf1Q8R3P9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.9■□□□□ 0.3
Slf1Q8R3P9 Gm5408-201ENSMUST00000197998 747 ntBASIC16.9■□□□□ 0.3
Slf1Q8R3P9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Slf1Q8R3P9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Slf1Q8R3P9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slf1Q8R3P9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slf1Q8R3P9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.9■□□□□ 0.3
Slf1Q8R3P9 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slf1Q8R3P9 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slf1Q8R3P9 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slf1Q8R3P9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slf1Q8R3P9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slf1Q8R3P9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Slf1Q8R3P9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Slf1Q8R3P9 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.89■□□□□ 0.3
Slf1Q8R3P9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slf1Q8R3P9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slf1Q8R3P9 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slf1Q8R3P9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slf1Q8R3P9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slf1Q8R3P9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slf1Q8R3P9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Slf1Q8R3P9 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slf1Q8R3P9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Slf1Q8R3P9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slf1Q8R3P9 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Slf1Q8R3P9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slf1Q8R3P9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slf1Q8R3P9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slf1Q8R3P9 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slf1Q8R3P9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Slf1Q8R3P9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slf1Q8R3P9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slf1Q8R3P9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slf1Q8R3P9 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Slf1Q8R3P9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.88■□□□□ 0.29
Slf1Q8R3P9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Slf1Q8R3P9 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Slf1Q8R3P9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.88■□□□□ 0.29
Slf1Q8R3P9 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.88■□□□□ 0.29
Slf1Q8R3P9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Slf1Q8R3P9 Gm10602-201ENSMUST00000098239 609 ntBASIC16.88■□□□□ 0.29
Slf1Q8R3P9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slf1Q8R3P9 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slf1Q8R3P9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slf1Q8R3P9 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slf1Q8R3P9 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slf1Q8R3P9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slf1Q8R3P9 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
Slf1Q8R3P9 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slf1Q8R3P9 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.87■□□□□ 0.29
Slf1Q8R3P9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Slf1Q8R3P9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Slf1Q8R3P9 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slf1Q8R3P9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slf1Q8R3P9 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Slf1Q8R3P9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slf1Q8R3P9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slf1Q8R3P9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slf1Q8R3P9 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Slf1Q8R3P9 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slf1Q8R3P9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slf1Q8R3P9 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slf1Q8R3P9 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Slf1Q8R3P9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Slf1Q8R3P9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Slf1Q8R3P9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.87■□□□□ 0.29
Slf1Q8R3P9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slf1Q8R3P9 Gm38285-201ENSMUST00000192928 922 ntBASIC16.87■□□□□ 0.29
Slf1Q8R3P9 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.87■□□□□ 0.29
Slf1Q8R3P9 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.87■□□□□ 0.29
Slf1Q8R3P9 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.87■□□□□ 0.29
Slf1Q8R3P9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slf1Q8R3P9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Slf1Q8R3P9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slf1Q8R3P9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slf1Q8R3P9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slf1Q8R3P9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slf1Q8R3P9 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slf1Q8R3P9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slf1Q8R3P9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.86■□□□□ 0.29
Slf1Q8R3P9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Slf1Q8R3P9 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.86■□□□□ 0.29
Slf1Q8R3P9 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slf1Q8R3P9 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.86■□□□□ 0.29
Slf1Q8R3P9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slf1Q8R3P9 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slf1Q8R3P9 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slf1Q8R3P9 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slf1Q8R3P9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.86■□□□□ 0.29
Slf1Q8R3P9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Slf1Q8R3P9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Slf1Q8R3P9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slf1Q8R3P9 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms