Protein–RNA interactions for Protein: Q8R316

Hbp1, HMG box-containing protein 1, mousemouse

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbp1Q8R316 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hbp1Q8R316 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hbp1Q8R316 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Hbp1Q8R316 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hbp1Q8R316 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Hbp1Q8R316 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hbp1Q8R316 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hbp1Q8R316 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hbp1Q8R316 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Hbp1Q8R316 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hbp1Q8R316 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hbp1Q8R316 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hbp1Q8R316 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.48■□□□□ 0.23
Hbp1Q8R316 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.48■□□□□ 0.23
Hbp1Q8R316 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hbp1Q8R316 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hbp1Q8R316 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.48■□□□□ 0.23
Hbp1Q8R316 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hbp1Q8R316 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Hbp1Q8R316 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hbp1Q8R316 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Hbp1Q8R316 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hbp1Q8R316 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hbp1Q8R316 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hbp1Q8R316 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hbp1Q8R316 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.48■□□□□ 0.23
Hbp1Q8R316 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hbp1Q8R316 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hbp1Q8R316 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hbp1Q8R316 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.47■□□□□ 0.23
Hbp1Q8R316 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Hbp1Q8R316 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hbp1Q8R316 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hbp1Q8R316 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hbp1Q8R316 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hbp1Q8R316 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hbp1Q8R316 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hbp1Q8R316 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.47■□□□□ 0.23
Hbp1Q8R316 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Hbp1Q8R316 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Hbp1Q8R316 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Hbp1Q8R316 Gm17971-201ENSMUST00000190239 806 ntBASIC16.47■□□□□ 0.23
Hbp1Q8R316 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hbp1Q8R316 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Hbp1Q8R316 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hbp1Q8R316 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hbp1Q8R316 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hbp1Q8R316 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
Hbp1Q8R316 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hbp1Q8R316 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Hbp1Q8R316 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hbp1Q8R316 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hbp1Q8R316 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Hbp1Q8R316 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hbp1Q8R316 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hbp1Q8R316 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hbp1Q8R316 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hbp1Q8R316 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hbp1Q8R316 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hbp1Q8R316 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hbp1Q8R316 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hbp1Q8R316 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hbp1Q8R316 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.46■□□□□ 0.23
Hbp1Q8R316 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hbp1Q8R316 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hbp1Q8R316 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.46■□□□□ 0.23
Hbp1Q8R316 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hbp1Q8R316 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Hbp1Q8R316 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hbp1Q8R316 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hbp1Q8R316 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.46■□□□□ 0.23
Hbp1Q8R316 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hbp1Q8R316 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hbp1Q8R316 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Hbp1Q8R316 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.46■□□□□ 0.23
Hbp1Q8R316 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hbp1Q8R316 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.46■□□□□ 0.22
Hbp1Q8R316 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.46■□□□□ 0.22
Hbp1Q8R316 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Hbp1Q8R316 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Hbp1Q8R316 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.46■□□□□ 0.22
Hbp1Q8R316 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Hbp1Q8R316 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Hbp1Q8R316 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hbp1Q8R316 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hbp1Q8R316 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hbp1Q8R316 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hbp1Q8R316 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hbp1Q8R316 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.45■□□□□ 0.22
Hbp1Q8R316 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.45■□□□□ 0.22
Hbp1Q8R316 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.45■□□□□ 0.22
Hbp1Q8R316 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hbp1Q8R316 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hbp1Q8R316 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hbp1Q8R316 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.45■□□□□ 0.22
Hbp1Q8R316 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hbp1Q8R316 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.45■□□□□ 0.22
Hbp1Q8R316 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hbp1Q8R316 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hbp1Q8R316 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms