Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nudcd3Q8R1N4 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Nudcd3Q8R1N4 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nudcd3Q8R1N4 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.72■□□□□ 0.27
Nudcd3Q8R1N4 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nudcd3Q8R1N4 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nudcd3Q8R1N4 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nudcd3Q8R1N4 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nudcd3Q8R1N4 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nudcd3Q8R1N4 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Nudcd3Q8R1N4 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Nudcd3Q8R1N4 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nudcd3Q8R1N4 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nudcd3Q8R1N4 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nudcd3Q8R1N4 Gm18284-201ENSMUST00000172604 624 ntBASIC16.72■□□□□ 0.27
Nudcd3Q8R1N4 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.72■□□□□ 0.27
Nudcd3Q8R1N4 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nudcd3Q8R1N4 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nudcd3Q8R1N4 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.72■□□□□ 0.27
Nudcd3Q8R1N4 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.72■□□□□ 0.27
Nudcd3Q8R1N4 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.72■□□□□ 0.27
Nudcd3Q8R1N4 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nudcd3Q8R1N4 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Nudcd3Q8R1N4 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Nudcd3Q8R1N4 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Nudcd3Q8R1N4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.72■□□□□ 0.27
Nudcd3Q8R1N4 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nudcd3Q8R1N4 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nudcd3Q8R1N4 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Nudcd3Q8R1N4 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Nudcd3Q8R1N4 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nudcd3Q8R1N4 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Nudcd3Q8R1N4 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.71■□□□□ 0.27
Nudcd3Q8R1N4 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.71■□□□□ 0.27
Nudcd3Q8R1N4 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nudcd3Q8R1N4 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nudcd3Q8R1N4 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.71■□□□□ 0.27
Nudcd3Q8R1N4 Gm4974-201ENSMUST00000209974 875 ntBASIC16.71■□□□□ 0.27
Nudcd3Q8R1N4 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.71■□□□□ 0.27
Nudcd3Q8R1N4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nudcd3Q8R1N4 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nudcd3Q8R1N4 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nudcd3Q8R1N4 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nudcd3Q8R1N4 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nudcd3Q8R1N4 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Nudcd3Q8R1N4 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nudcd3Q8R1N4 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Nudcd3Q8R1N4 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nudcd3Q8R1N4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nudcd3Q8R1N4 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Nudcd3Q8R1N4 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Nudcd3Q8R1N4 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Nudcd3Q8R1N4 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nudcd3Q8R1N4 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nudcd3Q8R1N4 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.7■□□□□ 0.26
Nudcd3Q8R1N4 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nudcd3Q8R1N4 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Nudcd3Q8R1N4 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nudcd3Q8R1N4 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nudcd3Q8R1N4 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Nudcd3Q8R1N4 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nudcd3Q8R1N4 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.7■□□□□ 0.26
Nudcd3Q8R1N4 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nudcd3Q8R1N4 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nudcd3Q8R1N4 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.7■□□□□ 0.26
Nudcd3Q8R1N4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nudcd3Q8R1N4 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nudcd3Q8R1N4 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nudcd3Q8R1N4 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nudcd3Q8R1N4 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nudcd3Q8R1N4 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nudcd3Q8R1N4 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nudcd3Q8R1N4 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nudcd3Q8R1N4 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nudcd3Q8R1N4 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nudcd3Q8R1N4 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Nudcd3Q8R1N4 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Nudcd3Q8R1N4 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nudcd3Q8R1N4 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nudcd3Q8R1N4 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nudcd3Q8R1N4 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nudcd3Q8R1N4 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nudcd3Q8R1N4 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nudcd3Q8R1N4 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.69■□□□□ 0.26
Nudcd3Q8R1N4 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nudcd3Q8R1N4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nudcd3Q8R1N4 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nudcd3Q8R1N4 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nudcd3Q8R1N4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Nudcd3Q8R1N4 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nudcd3Q8R1N4 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nudcd3Q8R1N4 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nudcd3Q8R1N4 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nudcd3Q8R1N4 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nudcd3Q8R1N4 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nudcd3Q8R1N4 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nudcd3Q8R1N4 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nudcd3Q8R1N4 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nudcd3Q8R1N4 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.68■□□□□ 0.26
Nudcd3Q8R1N4 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms