Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdlim2Q8R1G6 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pdlim2Q8R1G6 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Pdlim2Q8R1G6 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim2Q8R1G6 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Pdlim2Q8R1G6 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim2Q8R1G6 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim2Q8R1G6 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim2Q8R1G6 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim2Q8R1G6 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim2Q8R1G6 Nespas-201ENSMUST00000143738 1083 ntBASIC19.19■□□□□ 0.66
Pdlim2Q8R1G6 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.19■□□□□ 0.66
Pdlim2Q8R1G6 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim2Q8R1G6 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Pdlim2Q8R1G6 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.19■□□□□ 0.66
Pdlim2Q8R1G6 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim2Q8R1G6 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim2Q8R1G6 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim2Q8R1G6 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim2Q8R1G6 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim2Q8R1G6 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim2Q8R1G6 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim2Q8R1G6 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim2Q8R1G6 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim2Q8R1G6 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim2Q8R1G6 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim2Q8R1G6 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim2Q8R1G6 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim2Q8R1G6 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim2Q8R1G6 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pdlim2Q8R1G6 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.18■□□□□ 0.66
Pdlim2Q8R1G6 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdlim2Q8R1G6 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdlim2Q8R1G6 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Pdlim2Q8R1G6 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdlim2Q8R1G6 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
Pdlim2Q8R1G6 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.18■□□□□ 0.66
Pdlim2Q8R1G6 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Pdlim2Q8R1G6 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdlim2Q8R1G6 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdlim2Q8R1G6 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdlim2Q8R1G6 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdlim2Q8R1G6 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdlim2Q8R1G6 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdlim2Q8R1G6 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC19.18■□□□□ 0.66
Pdlim2Q8R1G6 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pdlim2Q8R1G6 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdlim2Q8R1G6 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdlim2Q8R1G6 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdlim2Q8R1G6 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdlim2Q8R1G6 Gm37728-201ENSMUST00000195025 2292 ntBASIC19.17■□□□□ 0.66
Pdlim2Q8R1G6 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pdlim2Q8R1G6 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC19.17■□□□□ 0.66
Pdlim2Q8R1G6 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.17■□□□□ 0.66
Pdlim2Q8R1G6 Gm45417-201ENSMUST00000209533 758 ntBASIC19.17■□□□□ 0.66
Pdlim2Q8R1G6 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdlim2Q8R1G6 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC19.17■□□□□ 0.66
Pdlim2Q8R1G6 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.17■□□□□ 0.66
Pdlim2Q8R1G6 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdlim2Q8R1G6 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdlim2Q8R1G6 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdlim2Q8R1G6 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pdlim2Q8R1G6 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdlim2Q8R1G6 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.16■□□□□ 0.66
Pdlim2Q8R1G6 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.16■□□□□ 0.66
Pdlim2Q8R1G6 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdlim2Q8R1G6 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pdlim2Q8R1G6 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdlim2Q8R1G6 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdlim2Q8R1G6 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Pdlim2Q8R1G6 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdlim2Q8R1G6 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Pdlim2Q8R1G6 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pdlim2Q8R1G6 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdlim2Q8R1G6 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdlim2Q8R1G6 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pdlim2Q8R1G6 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdlim2Q8R1G6 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Pdlim2Q8R1G6 Wnt10b-206ENSMUST00000228546 2709 ntBASIC19.16■□□□□ 0.66
Pdlim2Q8R1G6 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdlim2Q8R1G6 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdlim2Q8R1G6 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pdlim2Q8R1G6 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pdlim2Q8R1G6 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pdlim2Q8R1G6 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Pdlim2Q8R1G6 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pdlim2Q8R1G6 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pdlim2Q8R1G6 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pdlim2Q8R1G6 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pdlim2Q8R1G6 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pdlim2Q8R1G6 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pdlim2Q8R1G6 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pdlim2Q8R1G6 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Pdlim2Q8R1G6 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pdlim2Q8R1G6 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pdlim2Q8R1G6 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pdlim2Q8R1G6 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pdlim2Q8R1G6 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pdlim2Q8R1G6 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pdlim2Q8R1G6 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms