Protein–RNA interactions for Protein: Q8N7N6

Traf3ip2, TRAF3-interacting protein 2, mousemouse

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf3ip2Q8N7N6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Traf3ip2Q8N7N6 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Traf3ip2Q8N7N6 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.25■□□□□ 0.35
Traf3ip2Q8N7N6 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Traf3ip2Q8N7N6 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Traf3ip2Q8N7N6 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Traf3ip2Q8N7N6 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Traf3ip2Q8N7N6 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Traf3ip2Q8N7N6 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Traf3ip2Q8N7N6 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Traf3ip2Q8N7N6 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Traf3ip2Q8N7N6 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.24■□□□□ 0.35
Traf3ip2Q8N7N6 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Traf3ip2Q8N7N6 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Traf3ip2Q8N7N6 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.24■□□□□ 0.35
Traf3ip2Q8N7N6 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Traf3ip2Q8N7N6 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.24■□□□□ 0.35
Traf3ip2Q8N7N6 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Traf3ip2Q8N7N6 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Traf3ip2Q8N7N6 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Traf3ip2Q8N7N6 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Traf3ip2Q8N7N6 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Traf3ip2Q8N7N6 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.24■□□□□ 0.35
Traf3ip2Q8N7N6 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.24■□□□□ 0.35
Traf3ip2Q8N7N6 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Traf3ip2Q8N7N6 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.24■□□□□ 0.35
Traf3ip2Q8N7N6 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Traf3ip2Q8N7N6 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Traf3ip2Q8N7N6 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Traf3ip2Q8N7N6 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Traf3ip2Q8N7N6 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Traf3ip2Q8N7N6 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Traf3ip2Q8N7N6 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Traf3ip2Q8N7N6 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Traf3ip2Q8N7N6 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Traf3ip2Q8N7N6 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Traf3ip2Q8N7N6 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Traf3ip2Q8N7N6 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Traf3ip2Q8N7N6 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.23■□□□□ 0.35
Traf3ip2Q8N7N6 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Traf3ip2Q8N7N6 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.23■□□□□ 0.35
Traf3ip2Q8N7N6 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Traf3ip2Q8N7N6 Gm5867-201ENSMUST00000063197 592 ntBASIC17.23■□□□□ 0.35
Traf3ip2Q8N7N6 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Traf3ip2Q8N7N6 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Traf3ip2Q8N7N6 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Traf3ip2Q8N7N6 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Traf3ip2Q8N7N6 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Traf3ip2Q8N7N6 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Traf3ip2Q8N7N6 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Traf3ip2Q8N7N6 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Traf3ip2Q8N7N6 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.22■□□□□ 0.35
Traf3ip2Q8N7N6 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.22■□□□□ 0.35
Traf3ip2Q8N7N6 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Traf3ip2Q8N7N6 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Traf3ip2Q8N7N6 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Traf3ip2Q8N7N6 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Traf3ip2Q8N7N6 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Traf3ip2Q8N7N6 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Traf3ip2Q8N7N6 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Traf3ip2Q8N7N6 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Traf3ip2Q8N7N6 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Traf3ip2Q8N7N6 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Traf3ip2Q8N7N6 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.21■□□□□ 0.35
Traf3ip2Q8N7N6 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Traf3ip2Q8N7N6 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Traf3ip2Q8N7N6 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Traf3ip2Q8N7N6 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.21■□□□□ 0.35
Traf3ip2Q8N7N6 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Traf3ip2Q8N7N6 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.21■□□□□ 0.35
Traf3ip2Q8N7N6 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Traf3ip2Q8N7N6 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Traf3ip2Q8N7N6 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.21■□□□□ 0.35
Traf3ip2Q8N7N6 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Traf3ip2Q8N7N6 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Traf3ip2Q8N7N6 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Traf3ip2Q8N7N6 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Traf3ip2Q8N7N6 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.21■□□□□ 0.35
Traf3ip2Q8N7N6 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Traf3ip2Q8N7N6 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Traf3ip2Q8N7N6 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Traf3ip2Q8N7N6 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Traf3ip2Q8N7N6 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
Traf3ip2Q8N7N6 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Traf3ip2Q8N7N6 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Traf3ip2Q8N7N6 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Traf3ip2Q8N7N6 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Traf3ip2Q8N7N6 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Traf3ip2Q8N7N6 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Traf3ip2Q8N7N6 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.2■□□□□ 0.34
Traf3ip2Q8N7N6 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Traf3ip2Q8N7N6 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Traf3ip2Q8N7N6 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Traf3ip2Q8N7N6 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Traf3ip2Q8N7N6 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Traf3ip2Q8N7N6 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Traf3ip2Q8N7N6 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Traf3ip2Q8N7N6 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.2■□□□□ 0.34
Traf3ip2Q8N7N6 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Traf3ip2Q8N7N6 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms