Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ddx54Q8K4L0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ddx54Q8K4L0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Ddx54Q8K4L0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ddx54Q8K4L0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ddx54Q8K4L0 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ddx54Q8K4L0 Gm15500-202ENSMUST00000071641 1019 ntBASIC21.81■■□□□ 1.08
Ddx54Q8K4L0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Ddx54Q8K4L0 Gfra2-202ENSMUST00000227633 1480 ntBASIC21.81■■□□□ 1.08
Ddx54Q8K4L0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Ddx54Q8K4L0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Ddx54Q8K4L0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ddx54Q8K4L0 Gm3928-201ENSMUST00000121141 1307 ntBASIC21.8■■□□□ 1.08
Ddx54Q8K4L0 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx54Q8K4L0 Gm15442-201ENSMUST00000117905 1527 ntBASIC21.8■■□□□ 1.08
Ddx54Q8K4L0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx54Q8K4L0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx54Q8K4L0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx54Q8K4L0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx54Q8K4L0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.8■■□□□ 1.08
Ddx54Q8K4L0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx54Q8K4L0 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx54Q8K4L0 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC21.8■■□□□ 1.08
Ddx54Q8K4L0 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC21.8■■□□□ 1.08
Ddx54Q8K4L0 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx54Q8K4L0 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC21.8■■□□□ 1.08
Ddx54Q8K4L0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC21.8■■□□□ 1.08
Ddx54Q8K4L0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC21.8■■□□□ 1.08
Ddx54Q8K4L0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx54Q8K4L0 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx54Q8K4L0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx54Q8K4L0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx54Q8K4L0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
Ddx54Q8K4L0 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx54Q8K4L0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx54Q8K4L0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx54Q8K4L0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx54Q8K4L0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx54Q8K4L0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx54Q8K4L0 Gm12497-201ENSMUST00000138778 237 ntBASIC21.79■■□□□ 1.08
Ddx54Q8K4L0 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC21.79■■□□□ 1.08
Ddx54Q8K4L0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx54Q8K4L0 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC21.79■■□□□ 1.08
Ddx54Q8K4L0 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx54Q8K4L0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx54Q8K4L0 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx54Q8K4L0 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx54Q8K4L0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Ddx54Q8K4L0 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
Ddx54Q8K4L0 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx54Q8K4L0 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx54Q8K4L0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx54Q8K4L0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx54Q8K4L0 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC21.78■■□□□ 1.08
Ddx54Q8K4L0 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC21.78■■□□□ 1.08
Ddx54Q8K4L0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx54Q8K4L0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx54Q8K4L0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Ddx54Q8K4L0 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx54Q8K4L0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx54Q8K4L0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx54Q8K4L0 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx54Q8K4L0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx54Q8K4L0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Ddx54Q8K4L0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Ddx54Q8K4L0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx54Q8K4L0 Gm7507-201ENSMUST00000183053 1008 ntBASIC21.77■■□□□ 1.08
Ddx54Q8K4L0 Mir6956-201ENSMUST00000183598 62 ntBASIC21.77■■□□□ 1.08
Ddx54Q8K4L0 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC21.77■■□□□ 1.08
Ddx54Q8K4L0 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC21.77■■□□□ 1.08
Ddx54Q8K4L0 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Ddx54Q8K4L0 Gm8655-201ENSMUST00000221159 852 ntBASIC21.77■■□□□ 1.08
Ddx54Q8K4L0 AC139382.1-201ENSMUST00000221402 498 ntBASIC21.77■■□□□ 1.08
Ddx54Q8K4L0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx54Q8K4L0 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx54Q8K4L0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx54Q8K4L0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.77■■□□□ 1.08
Ddx54Q8K4L0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx54Q8K4L0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Ddx54Q8K4L0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ddx54Q8K4L0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ddx54Q8K4L0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC21.77■■□□□ 1.07
Ddx54Q8K4L0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ddx54Q8K4L0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC21.76■■□□□ 1.07
Ddx54Q8K4L0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ddx54Q8K4L0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ddx54Q8K4L0 Gm11025-201ENSMUST00000140773 466 ntBASIC21.76■■□□□ 1.07
Ddx54Q8K4L0 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ddx54Q8K4L0 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ddx54Q8K4L0 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC21.76■■□□□ 1.07
Ddx54Q8K4L0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ddx54Q8K4L0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ddx54Q8K4L0 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Ddx54Q8K4L0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx54Q8K4L0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx54Q8K4L0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx54Q8K4L0 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx54Q8K4L0 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC21.75■■□□□ 1.07
Ddx54Q8K4L0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx54Q8K4L0 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms