Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Alms1Q8K4E0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.27■□□□□ 0.2
Alms1Q8K4E0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.27■□□□□ 0.2
Alms1Q8K4E0 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.27■□□□□ 0.2
Alms1Q8K4E0 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.27■□□□□ 0.2
Alms1Q8K4E0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Alms1Q8K4E0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Alms1Q8K4E0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Alms1Q8K4E0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Alms1Q8K4E0 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Alms1Q8K4E0 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Alms1Q8K4E0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Alms1Q8K4E0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.27■□□□□ 0.2
Alms1Q8K4E0 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.27■□□□□ 0.2
Alms1Q8K4E0 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Alms1Q8K4E0 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Alms1Q8K4E0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Alms1Q8K4E0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Alms1Q8K4E0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Alms1Q8K4E0 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.27■□□□□ 0.19
Alms1Q8K4E0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Alms1Q8K4E0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.27■□□□□ 0.19
Alms1Q8K4E0 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.27■□□□□ 0.19
Alms1Q8K4E0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.27■□□□□ 0.19
Alms1Q8K4E0 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Alms1Q8K4E0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Alms1Q8K4E0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Alms1Q8K4E0 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Alms1Q8K4E0 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.26■□□□□ 0.19
Alms1Q8K4E0 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.26■□□□□ 0.19
Alms1Q8K4E0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Alms1Q8K4E0 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Alms1Q8K4E0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.26■□□□□ 0.19
Alms1Q8K4E0 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.26■□□□□ 0.19
Alms1Q8K4E0 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Alms1Q8K4E0 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Alms1Q8K4E0 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Alms1Q8K4E0 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.26■□□□□ 0.19
Alms1Q8K4E0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Alms1Q8K4E0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Alms1Q8K4E0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Alms1Q8K4E0 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Alms1Q8K4E0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Alms1Q8K4E0 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Alms1Q8K4E0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Alms1Q8K4E0 Gm1401-201ENSMUST00000122048 772 ntBASIC16.25■□□□□ 0.19
Alms1Q8K4E0 Gm25911-201ENSMUST00000157621 56 ntBASIC16.25■□□□□ 0.19
Alms1Q8K4E0 Mir5131-201ENSMUST00000175426 93 ntBASIC16.25■□□□□ 0.19
Alms1Q8K4E0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Alms1Q8K4E0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Alms1Q8K4E0 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.25■□□□□ 0.19
Alms1Q8K4E0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Alms1Q8K4E0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Alms1Q8K4E0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Alms1Q8K4E0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.25■□□□□ 0.19
Alms1Q8K4E0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Alms1Q8K4E0 Gm7862-201ENSMUST00000121461 292 ntBASIC16.25■□□□□ 0.19
Alms1Q8K4E0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.25■□□□□ 0.19
Alms1Q8K4E0 Gm5364-201ENSMUST00000216789 889 ntBASIC16.25■□□□□ 0.19
Alms1Q8K4E0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Alms1Q8K4E0 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.25■□□□□ 0.19
Alms1Q8K4E0 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Alms1Q8K4E0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Alms1Q8K4E0 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Alms1Q8K4E0 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Alms1Q8K4E0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Alms1Q8K4E0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Alms1Q8K4E0 Gm27000-201ENSMUST00000182943 842 ntBASIC16.25■□□□□ 0.19
Alms1Q8K4E0 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.25■□□□□ 0.19
Alms1Q8K4E0 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Alms1Q8K4E0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Alms1Q8K4E0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Alms1Q8K4E0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Alms1Q8K4E0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Alms1Q8K4E0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Alms1Q8K4E0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Alms1Q8K4E0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Alms1Q8K4E0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Alms1Q8K4E0 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Alms1Q8K4E0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Alms1Q8K4E0 Gm6736-201ENSMUST00000166583 948 ntBASIC16.24■□□□□ 0.19
Alms1Q8K4E0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
Alms1Q8K4E0 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Alms1Q8K4E0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Alms1Q8K4E0 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Alms1Q8K4E0 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Alms1Q8K4E0 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Alms1Q8K4E0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Alms1Q8K4E0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Alms1Q8K4E0 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Alms1Q8K4E0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Alms1Q8K4E0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Alms1Q8K4E0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Alms1Q8K4E0 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Alms1Q8K4E0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Alms1Q8K4E0 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Alms1Q8K4E0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Alms1Q8K4E0 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Alms1Q8K4E0 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Alms1Q8K4E0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms