Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cchcr1Q8K2I2 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cchcr1Q8K2I2 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cchcr1Q8K2I2 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cchcr1Q8K2I2 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cchcr1Q8K2I2 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cchcr1Q8K2I2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cchcr1Q8K2I2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cchcr1Q8K2I2 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Cchcr1Q8K2I2 Gm27463-201ENSMUST00000183569 57 ntBASIC19.72■□□□□ 0.75
Cchcr1Q8K2I2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Cchcr1Q8K2I2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cchcr1Q8K2I2 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cchcr1Q8K2I2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cchcr1Q8K2I2 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cchcr1Q8K2I2 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.72■□□□□ 0.75
Cchcr1Q8K2I2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.72■□□□□ 0.75
Cchcr1Q8K2I2 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cchcr1Q8K2I2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cchcr1Q8K2I2 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cchcr1Q8K2I2 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cchcr1Q8K2I2 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cchcr1Q8K2I2 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cchcr1Q8K2I2 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cchcr1Q8K2I2 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cchcr1Q8K2I2 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cchcr1Q8K2I2 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cchcr1Q8K2I2 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cchcr1Q8K2I2 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cchcr1Q8K2I2 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cchcr1Q8K2I2 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC19.71■□□□□ 0.75
Cchcr1Q8K2I2 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cchcr1Q8K2I2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.71■□□□□ 0.75
Cchcr1Q8K2I2 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cchcr1Q8K2I2 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cchcr1Q8K2I2 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cchcr1Q8K2I2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cchcr1Q8K2I2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Cchcr1Q8K2I2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cchcr1Q8K2I2 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cchcr1Q8K2I2 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cchcr1Q8K2I2 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.7■□□□□ 0.74
Cchcr1Q8K2I2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cchcr1Q8K2I2 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cchcr1Q8K2I2 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cchcr1Q8K2I2 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cchcr1Q8K2I2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cchcr1Q8K2I2 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cchcr1Q8K2I2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.7■□□□□ 0.74
Cchcr1Q8K2I2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cchcr1Q8K2I2 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cchcr1Q8K2I2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cchcr1Q8K2I2 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cchcr1Q8K2I2 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cchcr1Q8K2I2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cchcr1Q8K2I2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Cchcr1Q8K2I2 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cchcr1Q8K2I2 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cchcr1Q8K2I2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cchcr1Q8K2I2 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cchcr1Q8K2I2 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cchcr1Q8K2I2 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cchcr1Q8K2I2 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cchcr1Q8K2I2 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cchcr1Q8K2I2 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cchcr1Q8K2I2 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cchcr1Q8K2I2 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cchcr1Q8K2I2 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.69■□□□□ 0.74
Cchcr1Q8K2I2 Gm22240-201ENSMUST00000175225 82 ntBASIC19.69■□□□□ 0.74
Cchcr1Q8K2I2 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.69■□□□□ 0.74
Cchcr1Q8K2I2 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cchcr1Q8K2I2 Gm10812-201ENSMUST00000099864 546 ntBASIC19.69■□□□□ 0.74
Cchcr1Q8K2I2 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cchcr1Q8K2I2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cchcr1Q8K2I2 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cchcr1Q8K2I2 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.69■□□□□ 0.74
Cchcr1Q8K2I2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cchcr1Q8K2I2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Cchcr1Q8K2I2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cchcr1Q8K2I2 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cchcr1Q8K2I2 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cchcr1Q8K2I2 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cchcr1Q8K2I2 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cchcr1Q8K2I2 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cchcr1Q8K2I2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.68■□□□□ 0.74
Cchcr1Q8K2I2 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cchcr1Q8K2I2 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cchcr1Q8K2I2 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.68■□□□□ 0.74
Cchcr1Q8K2I2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cchcr1Q8K2I2 Mir5122-201ENSMUST00000175004 89 ntBASIC19.68■□□□□ 0.74
Cchcr1Q8K2I2 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cchcr1Q8K2I2 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cchcr1Q8K2I2 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cchcr1Q8K2I2 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cchcr1Q8K2I2 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.68■□□□□ 0.74
Cchcr1Q8K2I2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cchcr1Q8K2I2 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cchcr1Q8K2I2 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cchcr1Q8K2I2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cchcr1Q8K2I2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms