Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim68Q8K243 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim68Q8K243 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trim68Q8K243 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim68Q8K243 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim68Q8K243 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim68Q8K243 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.08■□□□□ 0.48
Trim68Q8K243 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim68Q8K243 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim68Q8K243 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.08■□□□□ 0.48
Trim68Q8K243 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Trim68Q8K243 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim68Q8K243 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim68Q8K243 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Trim68Q8K243 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim68Q8K243 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
Trim68Q8K243 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim68Q8K243 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim68Q8K243 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim68Q8K243 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Trim68Q8K243 Actl10-202ENSMUST00000226583 1501 ntBASIC18.08■□□□□ 0.48
Trim68Q8K243 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim68Q8K243 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim68Q8K243 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim68Q8K243 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim68Q8K243 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim68Q8K243 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim68Q8K243 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim68Q8K243 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim68Q8K243 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim68Q8K243 Gm13884-201ENSMUST00000118103 829 ntBASIC18.07■□□□□ 0.48
Trim68Q8K243 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim68Q8K243 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim68Q8K243 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.07■□□□□ 0.48
Trim68Q8K243 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.07■□□□□ 0.48
Trim68Q8K243 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.07■□□□□ 0.48
Trim68Q8K243 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim68Q8K243 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trim68Q8K243 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim68Q8K243 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim68Q8K243 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim68Q8K243 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim68Q8K243 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim68Q8K243 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim68Q8K243 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim68Q8K243 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.06■□□□□ 0.48
Trim68Q8K243 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim68Q8K243 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim68Q8K243 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim68Q8K243 Mir8098-201ENSMUST00000184011 137 ntBASIC18.06■□□□□ 0.48
Trim68Q8K243 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
Trim68Q8K243 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim68Q8K243 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim68Q8K243 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim68Q8K243 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim68Q8K243 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim68Q8K243 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim68Q8K243 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim68Q8K243 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim68Q8K243 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Trim68Q8K243 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim68Q8K243 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Trim68Q8K243 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim68Q8K243 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim68Q8K243 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Trim68Q8K243 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Trim68Q8K243 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Trim68Q8K243 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim68Q8K243 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim68Q8K243 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim68Q8K243 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim68Q8K243 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim68Q8K243 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim68Q8K243 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Trim68Q8K243 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim68Q8K243 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim68Q8K243 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim68Q8K243 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim68Q8K243 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim68Q8K243 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim68Q8K243 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim68Q8K243 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim68Q8K243 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim68Q8K243 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.04■□□□□ 0.48
Trim68Q8K243 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim68Q8K243 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim68Q8K243 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim68Q8K243 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim68Q8K243 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim68Q8K243 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim68Q8K243 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim68Q8K243 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim68Q8K243 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim68Q8K243 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim68Q8K243 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim68Q8K243 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim68Q8K243 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim68Q8K243 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Trim68Q8K243 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.04■□□□□ 0.48
Trim68Q8K243 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms