Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cnot3Q8K0V4 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cnot3Q8K0V4 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
Cnot3Q8K0V4 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cnot3Q8K0V4 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cnot3Q8K0V4 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cnot3Q8K0V4 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cnot3Q8K0V4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cnot3Q8K0V4 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cnot3Q8K0V4 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cnot3Q8K0V4 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cnot3Q8K0V4 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cnot3Q8K0V4 Gm15375-201ENSMUST00000119510 849 ntBASIC15.71■□□□□ 0.11
Cnot3Q8K0V4 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.71■□□□□ 0.11
Cnot3Q8K0V4 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cnot3Q8K0V4 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Cnot3Q8K0V4 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cnot3Q8K0V4 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Cnot3Q8K0V4 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cnot3Q8K0V4 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cnot3Q8K0V4 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cnot3Q8K0V4 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cnot3Q8K0V4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Cnot3Q8K0V4 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cnot3Q8K0V4 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cnot3Q8K0V4 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cnot3Q8K0V4 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.7■□□□□ 0.1
Cnot3Q8K0V4 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Cnot3Q8K0V4 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cnot3Q8K0V4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Cnot3Q8K0V4 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
Cnot3Q8K0V4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cnot3Q8K0V4 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cnot3Q8K0V4 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cnot3Q8K0V4 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cnot3Q8K0V4 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cnot3Q8K0V4 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cnot3Q8K0V4 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cnot3Q8K0V4 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.7■□□□□ 0.1
Cnot3Q8K0V4 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cnot3Q8K0V4 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cnot3Q8K0V4 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cnot3Q8K0V4 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Cnot3Q8K0V4 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cnot3Q8K0V4 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cnot3Q8K0V4 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cnot3Q8K0V4 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cnot3Q8K0V4 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cnot3Q8K0V4 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cnot3Q8K0V4 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.69■□□□□ 0.1
Cnot3Q8K0V4 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Cnot3Q8K0V4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.69■□□□□ 0.1
Cnot3Q8K0V4 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cnot3Q8K0V4 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cnot3Q8K0V4 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cnot3Q8K0V4 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cnot3Q8K0V4 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cnot3Q8K0V4 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cnot3Q8K0V4 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cnot3Q8K0V4 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cnot3Q8K0V4 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Cnot3Q8K0V4 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Cnot3Q8K0V4 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cnot3Q8K0V4 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Cnot3Q8K0V4 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cnot3Q8K0V4 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cnot3Q8K0V4 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cnot3Q8K0V4 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cnot3Q8K0V4 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cnot3Q8K0V4 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cnot3Q8K0V4 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cnot3Q8K0V4 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cnot3Q8K0V4 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cnot3Q8K0V4 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cnot3Q8K0V4 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cnot3Q8K0V4 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cnot3Q8K0V4 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Cnot3Q8K0V4 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cnot3Q8K0V4 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Cnot3Q8K0V4 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cnot3Q8K0V4 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cnot3Q8K0V4 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cnot3Q8K0V4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cnot3Q8K0V4 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cnot3Q8K0V4 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.68■□□□□ 0.1
Cnot3Q8K0V4 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cnot3Q8K0V4 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cnot3Q8K0V4 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.67■□□□□ 0.1
Cnot3Q8K0V4 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cnot3Q8K0V4 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cnot3Q8K0V4 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cnot3Q8K0V4 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cnot3Q8K0V4 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cnot3Q8K0V4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cnot3Q8K0V4 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cnot3Q8K0V4 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cnot3Q8K0V4 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cnot3Q8K0V4 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Cnot3Q8K0V4 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cnot3Q8K0V4 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms