Protein–RNA interactions for Protein: Q8CII9

Crlf2, Cytokine receptor-like factor 2, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf2Q8CII9 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Crlf2Q8CII9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Crlf2Q8CII9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Crlf2Q8CII9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Crlf2Q8CII9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Crlf2Q8CII9 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Crlf2Q8CII9 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Crlf2Q8CII9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Crlf2Q8CII9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Crlf2Q8CII9 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Crlf2Q8CII9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.81■□□□□ 0.44
Crlf2Q8CII9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.81■□□□□ 0.44
Crlf2Q8CII9 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Crlf2Q8CII9 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Crlf2Q8CII9 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Crlf2Q8CII9 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.81■□□□□ 0.44
Crlf2Q8CII9 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Crlf2Q8CII9 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Crlf2Q8CII9 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.81■□□□□ 0.44
Crlf2Q8CII9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Crlf2Q8CII9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Crlf2Q8CII9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.81■□□□□ 0.44
Crlf2Q8CII9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Crlf2Q8CII9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Crlf2Q8CII9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Crlf2Q8CII9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Crlf2Q8CII9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Crlf2Q8CII9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Crlf2Q8CII9 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Crlf2Q8CII9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Crlf2Q8CII9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Crlf2Q8CII9 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Crlf2Q8CII9 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.8■□□□□ 0.44
Crlf2Q8CII9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Crlf2Q8CII9 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.8■□□□□ 0.44
Crlf2Q8CII9 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Crlf2Q8CII9 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Crlf2Q8CII9 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.8■□□□□ 0.44
Crlf2Q8CII9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.8■□□□□ 0.44
Crlf2Q8CII9 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Crlf2Q8CII9 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Crlf2Q8CII9 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.8■□□□□ 0.44
Crlf2Q8CII9 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Crlf2Q8CII9 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Crlf2Q8CII9 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Crlf2Q8CII9 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Crlf2Q8CII9 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.8■□□□□ 0.44
Crlf2Q8CII9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Crlf2Q8CII9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
Crlf2Q8CII9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Crlf2Q8CII9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Crlf2Q8CII9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Crlf2Q8CII9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Crlf2Q8CII9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Crlf2Q8CII9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Crlf2Q8CII9 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Crlf2Q8CII9 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.79■□□□□ 0.44
Crlf2Q8CII9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.79■□□□□ 0.44
Crlf2Q8CII9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Crlf2Q8CII9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Crlf2Q8CII9 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Crlf2Q8CII9 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Crlf2Q8CII9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Crlf2Q8CII9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Crlf2Q8CII9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Crlf2Q8CII9 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Crlf2Q8CII9 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.79■□□□□ 0.44
Crlf2Q8CII9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Crlf2Q8CII9 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Crlf2Q8CII9 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.79■□□□□ 0.44
Crlf2Q8CII9 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.79■□□□□ 0.44
Crlf2Q8CII9 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.79■□□□□ 0.44
Crlf2Q8CII9 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Crlf2Q8CII9 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC17.79■□□□□ 0.44
Crlf2Q8CII9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Crlf2Q8CII9 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.79■□□□□ 0.44
Crlf2Q8CII9 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.79■□□□□ 0.44
Crlf2Q8CII9 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Crlf2Q8CII9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.79■□□□□ 0.44
Crlf2Q8CII9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.79■□□□□ 0.44
Crlf2Q8CII9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Crlf2Q8CII9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Crlf2Q8CII9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Crlf2Q8CII9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Crlf2Q8CII9 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Crlf2Q8CII9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Crlf2Q8CII9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Crlf2Q8CII9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Crlf2Q8CII9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Crlf2Q8CII9 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Crlf2Q8CII9 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Crlf2Q8CII9 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Crlf2Q8CII9 Mir7023-201ENSMUST00000185093 64 ntBASIC17.78■□□□□ 0.44
Crlf2Q8CII9 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.78■□□□□ 0.44
Crlf2Q8CII9 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Crlf2Q8CII9 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Crlf2Q8CII9 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Crlf2Q8CII9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Crlf2Q8CII9 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Crlf2Q8CII9 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms