Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clip4Q8CI96 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Clip4Q8CI96 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clip4Q8CI96 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clip4Q8CI96 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clip4Q8CI96 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Clip4Q8CI96 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Clip4Q8CI96 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clip4Q8CI96 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clip4Q8CI96 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clip4Q8CI96 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Clip4Q8CI96 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Clip4Q8CI96 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Clip4Q8CI96 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clip4Q8CI96 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.82■□□□□ 0.28
Clip4Q8CI96 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Clip4Q8CI96 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Clip4Q8CI96 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.82■□□□□ 0.28
Clip4Q8CI96 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Clip4Q8CI96 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Clip4Q8CI96 Gm27463-201ENSMUST00000183569 57 ntBASIC16.82■□□□□ 0.28
Clip4Q8CI96 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Clip4Q8CI96 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.82■□□□□ 0.28
Clip4Q8CI96 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Clip4Q8CI96 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.82■□□□□ 0.28
Clip4Q8CI96 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clip4Q8CI96 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Clip4Q8CI96 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clip4Q8CI96 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.82■□□□□ 0.28
Clip4Q8CI96 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clip4Q8CI96 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clip4Q8CI96 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clip4Q8CI96 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clip4Q8CI96 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clip4Q8CI96 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clip4Q8CI96 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.81■□□□□ 0.28
Clip4Q8CI96 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clip4Q8CI96 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clip4Q8CI96 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clip4Q8CI96 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.81■□□□□ 0.28
Clip4Q8CI96 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clip4Q8CI96 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clip4Q8CI96 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Clip4Q8CI96 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clip4Q8CI96 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clip4Q8CI96 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clip4Q8CI96 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clip4Q8CI96 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clip4Q8CI96 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clip4Q8CI96 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clip4Q8CI96 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clip4Q8CI96 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Clip4Q8CI96 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clip4Q8CI96 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clip4Q8CI96 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.8■□□□□ 0.28
Clip4Q8CI96 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clip4Q8CI96 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clip4Q8CI96 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.8■□□□□ 0.28
Clip4Q8CI96 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Clip4Q8CI96 Mir8112-201ENSMUST00000184382 131 ntBASIC16.8■□□□□ 0.28
Clip4Q8CI96 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.8■□□□□ 0.28
Clip4Q8CI96 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clip4Q8CI96 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clip4Q8CI96 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clip4Q8CI96 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clip4Q8CI96 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clip4Q8CI96 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clip4Q8CI96 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clip4Q8CI96 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clip4Q8CI96 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clip4Q8CI96 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clip4Q8CI96 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.79■□□□□ 0.28
Clip4Q8CI96 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clip4Q8CI96 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clip4Q8CI96 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.79■□□□□ 0.28
Clip4Q8CI96 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clip4Q8CI96 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clip4Q8CI96 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Clip4Q8CI96 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clip4Q8CI96 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clip4Q8CI96 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clip4Q8CI96 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Clip4Q8CI96 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.79■□□□□ 0.28
Clip4Q8CI96 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clip4Q8CI96 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clip4Q8CI96 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clip4Q8CI96 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clip4Q8CI96 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clip4Q8CI96 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clip4Q8CI96 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clip4Q8CI96 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clip4Q8CI96 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clip4Q8CI96 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clip4Q8CI96 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Clip4Q8CI96 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.78■□□□□ 0.28
Clip4Q8CI96 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.78■□□□□ 0.28
Clip4Q8CI96 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Clip4Q8CI96 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clip4Q8CI96 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clip4Q8CI96 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms