Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rftn2Q8CHX7 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.71■□□□□ 0.43
Rftn2Q8CHX7 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.71■□□□□ 0.43
Rftn2Q8CHX7 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Rftn2Q8CHX7 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rftn2Q8CHX7 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rftn2Q8CHX7 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rftn2Q8CHX7 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rftn2Q8CHX7 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rftn2Q8CHX7 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Rftn2Q8CHX7 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rftn2Q8CHX7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rftn2Q8CHX7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rftn2Q8CHX7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rftn2Q8CHX7 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rftn2Q8CHX7 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.7■□□□□ 0.42
Rftn2Q8CHX7 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rftn2Q8CHX7 Gm27741-201ENSMUST00000185060 237 ntBASIC17.7■□□□□ 0.42
Rftn2Q8CHX7 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rftn2Q8CHX7 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.7■□□□□ 0.42
Rftn2Q8CHX7 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rftn2Q8CHX7 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rftn2Q8CHX7 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rftn2Q8CHX7 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rftn2Q8CHX7 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rftn2Q8CHX7 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rftn2Q8CHX7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Rftn2Q8CHX7 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rftn2Q8CHX7 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rftn2Q8CHX7 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rftn2Q8CHX7 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rftn2Q8CHX7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rftn2Q8CHX7 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.69■□□□□ 0.42
Rftn2Q8CHX7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rftn2Q8CHX7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.69■□□□□ 0.42
Rftn2Q8CHX7 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Rftn2Q8CHX7 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.69■□□□□ 0.42
Rftn2Q8CHX7 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rftn2Q8CHX7 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rftn2Q8CHX7 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Rftn2Q8CHX7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rftn2Q8CHX7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rftn2Q8CHX7 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.69■□□□□ 0.42
Rftn2Q8CHX7 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rftn2Q8CHX7 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.69■□□□□ 0.42
Rftn2Q8CHX7 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rftn2Q8CHX7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rftn2Q8CHX7 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rftn2Q8CHX7 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rftn2Q8CHX7 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rftn2Q8CHX7 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Rftn2Q8CHX7 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rftn2Q8CHX7 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rftn2Q8CHX7 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.68■□□□□ 0.42
Rftn2Q8CHX7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rftn2Q8CHX7 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rftn2Q8CHX7 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rftn2Q8CHX7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rftn2Q8CHX7 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rftn2Q8CHX7 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.67■□□□□ 0.42
Rftn2Q8CHX7 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rftn2Q8CHX7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Rftn2Q8CHX7 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.67■□□□□ 0.42
Rftn2Q8CHX7 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rftn2Q8CHX7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rftn2Q8CHX7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rftn2Q8CHX7 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.67■□□□□ 0.42
Rftn2Q8CHX7 Gm13312-201ENSMUST00000119631 718 ntBASIC17.67■□□□□ 0.42
Rftn2Q8CHX7 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rftn2Q8CHX7 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rftn2Q8CHX7 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rftn2Q8CHX7 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.67■□□□□ 0.42
Rftn2Q8CHX7 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.67■□□□□ 0.42
Rftn2Q8CHX7 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rftn2Q8CHX7 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rftn2Q8CHX7 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rftn2Q8CHX7 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rftn2Q8CHX7 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rftn2Q8CHX7 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rftn2Q8CHX7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rftn2Q8CHX7 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rftn2Q8CHX7 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rftn2Q8CHX7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rftn2Q8CHX7 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.67■□□□□ 0.42
Rftn2Q8CHX7 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rftn2Q8CHX7 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rftn2Q8CHX7 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rftn2Q8CHX7 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rftn2Q8CHX7 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rftn2Q8CHX7 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rftn2Q8CHX7 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rftn2Q8CHX7 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rftn2Q8CHX7 Rprl3-201ENSMUST00000157400 290 ntBASIC17.66■□□□□ 0.42
Rftn2Q8CHX7 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.66■□□□□ 0.42
Rftn2Q8CHX7 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rftn2Q8CHX7 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rftn2Q8CHX7 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rftn2Q8CHX7 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rftn2Q8CHX7 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rftn2Q8CHX7 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms