Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rp1l1Q8CGM2 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rp1l1Q8CGM2 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rp1l1Q8CGM2 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rp1l1Q8CGM2 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.27■□□□□ 0.36
Rp1l1Q8CGM2 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Rp1l1Q8CGM2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rp1l1Q8CGM2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rp1l1Q8CGM2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.27■□□□□ 0.35
Rp1l1Q8CGM2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Rp1l1Q8CGM2 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Rp1l1Q8CGM2 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.27■□□□□ 0.35
Rp1l1Q8CGM2 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.27■□□□□ 0.35
Rp1l1Q8CGM2 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Rp1l1Q8CGM2 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rp1l1Q8CGM2 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rp1l1Q8CGM2 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.27■□□□□ 0.35
Rp1l1Q8CGM2 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rp1l1Q8CGM2 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Rp1l1Q8CGM2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Rp1l1Q8CGM2 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Rp1l1Q8CGM2 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rp1l1Q8CGM2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rp1l1Q8CGM2 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rp1l1Q8CGM2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rp1l1Q8CGM2 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Rp1l1Q8CGM2 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rp1l1Q8CGM2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rp1l1Q8CGM2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rp1l1Q8CGM2 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rp1l1Q8CGM2 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rp1l1Q8CGM2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rp1l1Q8CGM2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rp1l1Q8CGM2 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rp1l1Q8CGM2 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rp1l1Q8CGM2 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.25■□□□□ 0.35
Rp1l1Q8CGM2 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.25■□□□□ 0.35
Rp1l1Q8CGM2 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rp1l1Q8CGM2 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rp1l1Q8CGM2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rp1l1Q8CGM2 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rp1l1Q8CGM2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rp1l1Q8CGM2 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rp1l1Q8CGM2 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rp1l1Q8CGM2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rp1l1Q8CGM2 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rp1l1Q8CGM2 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rp1l1Q8CGM2 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rp1l1Q8CGM2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rp1l1Q8CGM2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rp1l1Q8CGM2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rp1l1Q8CGM2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rp1l1Q8CGM2 Gm15920-201ENSMUST00000118998 402 ntBASIC17.24■□□□□ 0.35
Rp1l1Q8CGM2 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rp1l1Q8CGM2 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rp1l1Q8CGM2 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rp1l1Q8CGM2 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rp1l1Q8CGM2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rp1l1Q8CGM2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rp1l1Q8CGM2 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rp1l1Q8CGM2 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.24■□□□□ 0.35
Rp1l1Q8CGM2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rp1l1Q8CGM2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rp1l1Q8CGM2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.24■□□□□ 0.35
Rp1l1Q8CGM2 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rp1l1Q8CGM2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rp1l1Q8CGM2 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rp1l1Q8CGM2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.24■□□□□ 0.35
Rp1l1Q8CGM2 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rp1l1Q8CGM2 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rp1l1Q8CGM2 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rp1l1Q8CGM2 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rp1l1Q8CGM2 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rp1l1Q8CGM2 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rp1l1Q8CGM2 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.23■□□□□ 0.35
Rp1l1Q8CGM2 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rp1l1Q8CGM2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.23■□□□□ 0.35
Rp1l1Q8CGM2 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rp1l1Q8CGM2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rp1l1Q8CGM2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rp1l1Q8CGM2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.23■□□□□ 0.35
Rp1l1Q8CGM2 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.23■□□□□ 0.35
Rp1l1Q8CGM2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rp1l1Q8CGM2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rp1l1Q8CGM2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rp1l1Q8CGM2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.23■□□□□ 0.35
Rp1l1Q8CGM2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rp1l1Q8CGM2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.23■□□□□ 0.35
Rp1l1Q8CGM2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rp1l1Q8CGM2 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rp1l1Q8CGM2 Mir6956-201ENSMUST00000183598 62 ntBASIC17.22■□□□□ 0.35
Rp1l1Q8CGM2 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rp1l1Q8CGM2 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rp1l1Q8CGM2 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Rp1l1Q8CGM2 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rp1l1Q8CGM2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rp1l1Q8CGM2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rp1l1Q8CGM2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rp1l1Q8CGM2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rp1l1Q8CGM2 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms