Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab43Q8CG50 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab43Q8CG50 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rab43Q8CG50 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab43Q8CG50 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.23■□□□□ 0.19
Rab43Q8CG50 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.23■□□□□ 0.19
Rab43Q8CG50 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.23■□□□□ 0.19
Rab43Q8CG50 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab43Q8CG50 Gm8969-201ENSMUST00000199694 526 ntBASIC16.23■□□□□ 0.19
Rab43Q8CG50 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab43Q8CG50 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Rab43Q8CG50 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab43Q8CG50 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Rab43Q8CG50 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rab43Q8CG50 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Rab43Q8CG50 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab43Q8CG50 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rab43Q8CG50 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.23■□□□□ 0.19
Rab43Q8CG50 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rab43Q8CG50 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rab43Q8CG50 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rab43Q8CG50 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rab43Q8CG50 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rab43Q8CG50 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rab43Q8CG50 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Rab43Q8CG50 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Rab43Q8CG50 Gm13312-201ENSMUST00000119631 718 ntBASIC16.22■□□□□ 0.19
Rab43Q8CG50 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rab43Q8CG50 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.22■□□□□ 0.19
Rab43Q8CG50 Gm43514-201ENSMUST00000198852 424 ntBASIC16.22■□□□□ 0.19
Rab43Q8CG50 Gm6443-201ENSMUST00000203599 874 ntBASIC16.22■□□□□ 0.19
Rab43Q8CG50 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rab43Q8CG50 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rab43Q8CG50 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rab43Q8CG50 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Rab43Q8CG50 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rab43Q8CG50 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Rab43Q8CG50 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rab43Q8CG50 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rab43Q8CG50 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Rab43Q8CG50 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rab43Q8CG50 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rab43Q8CG50 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rab43Q8CG50 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Rab43Q8CG50 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rab43Q8CG50 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rab43Q8CG50 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Rab43Q8CG50 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rab43Q8CG50 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rab43Q8CG50 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rab43Q8CG50 Gm12644-201ENSMUST00000119935 606 ntBASIC16.21■□□□□ 0.19
Rab43Q8CG50 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.21■□□□□ 0.19
Rab43Q8CG50 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rab43Q8CG50 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rab43Q8CG50 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rab43Q8CG50 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rab43Q8CG50 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Rab43Q8CG50 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rab43Q8CG50 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rab43Q8CG50 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.21■□□□□ 0.18
Rab43Q8CG50 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rab43Q8CG50 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab43Q8CG50 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab43Q8CG50 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab43Q8CG50 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab43Q8CG50 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab43Q8CG50 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab43Q8CG50 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab43Q8CG50 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.2■□□□□ 0.18
Rab43Q8CG50 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.2■□□□□ 0.18
Rab43Q8CG50 Gm11452-201ENSMUST00000122376 690 ntBASIC16.2■□□□□ 0.18
Rab43Q8CG50 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.2■□□□□ 0.18
Rab43Q8CG50 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab43Q8CG50 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.2■□□□□ 0.18
Rab43Q8CG50 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab43Q8CG50 Gm18195-201ENSMUST00000207604 706 ntBASIC16.2■□□□□ 0.18
Rab43Q8CG50 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Rab43Q8CG50 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rab43Q8CG50 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab43Q8CG50 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab43Q8CG50 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab43Q8CG50 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Rab43Q8CG50 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab43Q8CG50 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab43Q8CG50 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rab43Q8CG50 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rab43Q8CG50 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab43Q8CG50 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Rab43Q8CG50 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rab43Q8CG50 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab43Q8CG50 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab43Q8CG50 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab43Q8CG50 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab43Q8CG50 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rab43Q8CG50 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab43Q8CG50 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab43Q8CG50 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab43Q8CG50 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.19■□□□□ 0.18
Rab43Q8CG50 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.19■□□□□ 0.18
Rab43Q8CG50 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms