Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Brf1Q8CFK2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Brf1Q8CFK2 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Brf1Q8CFK2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
Brf1Q8CFK2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Brf1Q8CFK2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Brf1Q8CFK2 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Brf1Q8CFK2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Brf1Q8CFK2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Brf1Q8CFK2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Brf1Q8CFK2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Brf1Q8CFK2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Brf1Q8CFK2 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Brf1Q8CFK2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Brf1Q8CFK2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Brf1Q8CFK2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Brf1Q8CFK2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Brf1Q8CFK2 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Brf1Q8CFK2 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Brf1Q8CFK2 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.13■□□□□ 0.81
Brf1Q8CFK2 Gm27389-201ENSMUST00000183622 195 ntBASIC20.13■□□□□ 0.81
Brf1Q8CFK2 Gm18115-201ENSMUST00000221209 621 ntBASIC20.13■□□□□ 0.81
Brf1Q8CFK2 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Brf1Q8CFK2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
Brf1Q8CFK2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Brf1Q8CFK2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Brf1Q8CFK2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Brf1Q8CFK2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Brf1Q8CFK2 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Brf1Q8CFK2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Brf1Q8CFK2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Brf1Q8CFK2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Brf1Q8CFK2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Brf1Q8CFK2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.12■□□□□ 0.81
Brf1Q8CFK2 Gm13836-201ENSMUST00000121159 501 ntBASIC20.12■□□□□ 0.81
Brf1Q8CFK2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Brf1Q8CFK2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.12■□□□□ 0.81
Brf1Q8CFK2 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Brf1Q8CFK2 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Brf1Q8CFK2 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Brf1Q8CFK2 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Brf1Q8CFK2 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Brf1Q8CFK2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Brf1Q8CFK2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Brf1Q8CFK2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Brf1Q8CFK2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Brf1Q8CFK2 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Brf1Q8CFK2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Brf1Q8CFK2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Brf1Q8CFK2 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
Brf1Q8CFK2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Brf1Q8CFK2 Gm11336-201ENSMUST00000118168 334 ntBASIC20.11■□□□□ 0.81
Brf1Q8CFK2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Brf1Q8CFK2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Brf1Q8CFK2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Brf1Q8CFK2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.11■□□□□ 0.81
Brf1Q8CFK2 Gm44450-201ENSMUST00000199528 114 ntBASIC20.11■□□□□ 0.81
Brf1Q8CFK2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC20.11■□□□□ 0.81
Brf1Q8CFK2 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Brf1Q8CFK2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Brf1Q8CFK2 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Brf1Q8CFK2 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Brf1Q8CFK2 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Brf1Q8CFK2 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Brf1Q8CFK2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC20.11■□□□□ 0.81
Brf1Q8CFK2 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Brf1Q8CFK2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Brf1Q8CFK2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Brf1Q8CFK2 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Brf1Q8CFK2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Brf1Q8CFK2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Brf1Q8CFK2 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Brf1Q8CFK2 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Brf1Q8CFK2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Brf1Q8CFK2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Brf1Q8CFK2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Brf1Q8CFK2 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Brf1Q8CFK2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Brf1Q8CFK2 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Brf1Q8CFK2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Brf1Q8CFK2 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Brf1Q8CFK2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Brf1Q8CFK2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Brf1Q8CFK2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC20.09■□□□□ 0.81
Brf1Q8CFK2 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Brf1Q8CFK2 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Brf1Q8CFK2 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Brf1Q8CFK2 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Brf1Q8CFK2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Brf1Q8CFK2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Brf1Q8CFK2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Brf1Q8CFK2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC20.09■□□□□ 0.81
Brf1Q8CFK2 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.09■□□□□ 0.81
Brf1Q8CFK2 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Brf1Q8CFK2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Brf1Q8CFK2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC20.09■□□□□ 0.81
Brf1Q8CFK2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Brf1Q8CFK2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Brf1Q8CFK2 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Brf1Q8CFK2 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms