Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm6345-202ENSMUST00000180900 204 ntBASIC19.67■□□□□ 0.74
Nup88Q8CEC0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nup88Q8CEC0 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.67■□□□□ 0.74
Nup88Q8CEC0 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nup88Q8CEC0 Gm10819-201ENSMUST00000099988 561 ntBASIC19.67■□□□□ 0.74
Nup88Q8CEC0 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nup88Q8CEC0 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nup88Q8CEC0 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nup88Q8CEC0 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Nup88Q8CEC0 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nup88Q8CEC0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nup88Q8CEC0 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nup88Q8CEC0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nup88Q8CEC0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.66■□□□□ 0.74
Nup88Q8CEC0 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nup88Q8CEC0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nup88Q8CEC0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Nup88Q8CEC0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nup88Q8CEC0 AA414768-201ENSMUST00000121924 1257 ntBASIC19.66■□□□□ 0.74
Nup88Q8CEC0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.66■□□□□ 0.74
Nup88Q8CEC0 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Nup88Q8CEC0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.66■□□□□ 0.74
Nup88Q8CEC0 Gm7367-201ENSMUST00000057611 492 ntBASIC19.66■□□□□ 0.74
Nup88Q8CEC0 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nup88Q8CEC0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nup88Q8CEC0 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Nup88Q8CEC0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nup88Q8CEC0 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nup88Q8CEC0 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup88Q8CEC0 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup88Q8CEC0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup88Q8CEC0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup88Q8CEC0 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup88Q8CEC0 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nup88Q8CEC0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Nup88Q8CEC0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nup88Q8CEC0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.65■□□□□ 0.74
Nup88Q8CEC0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.65■□□□□ 0.74
Nup88Q8CEC0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.65■□□□□ 0.74
Nup88Q8CEC0 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup88Q8CEC0 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Nup88Q8CEC0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup88Q8CEC0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup88Q8CEC0 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Nup88Q8CEC0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup88Q8CEC0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nup88Q8CEC0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nup88Q8CEC0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nup88Q8CEC0 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nup88Q8CEC0 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Nup88Q8CEC0 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nup88Q8CEC0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nup88Q8CEC0 Gm24841-201ENSMUST00000158676 357 ntBASIC19.64■□□□□ 0.73
Nup88Q8CEC0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nup88Q8CEC0 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nup88Q8CEC0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nup88Q8CEC0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nup88Q8CEC0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nup88Q8CEC0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nup88Q8CEC0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nup88Q8CEC0 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Nup88Q8CEC0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nup88Q8CEC0 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Nup88Q8CEC0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup88Q8CEC0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.63■□□□□ 0.73
Nup88Q8CEC0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup88Q8CEC0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup88Q8CEC0 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup88Q8CEC0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nup88Q8CEC0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup88Q8CEC0 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup88Q8CEC0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup88Q8CEC0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.63■□□□□ 0.73
Nup88Q8CEC0 Gm16061-201ENSMUST00000122167 857 ntBASIC19.63■□□□□ 0.73
Nup88Q8CEC0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nup88Q8CEC0 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nup88Q8CEC0 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.63■□□□□ 0.73
Nup88Q8CEC0 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.63■□□□□ 0.73
Nup88Q8CEC0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup88Q8CEC0 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup88Q8CEC0 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup88Q8CEC0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup88Q8CEC0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup88Q8CEC0 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup88Q8CEC0 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Nup88Q8CEC0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup88Q8CEC0 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Nup88Q8CEC0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup88Q8CEC0 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup88Q8CEC0 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Nup88Q8CEC0 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup88Q8CEC0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup88Q8CEC0 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Nup88Q8CEC0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Nup88Q8CEC0 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup88Q8CEC0 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup88Q8CEC0 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup88Q8CEC0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup88Q8CEC0 Gm18101-201ENSMUST00000215769 548 ntBASIC19.62■□□□□ 0.73
Nup88Q8CEC0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms