Protein–RNA interactions for Protein: Q8CDT7

Cabcoco1, Ciliary-associated calcium-binding coiled-coil protein 1, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cabcoco1Q8CDT7 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cabcoco1Q8CDT7 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cabcoco1Q8CDT7 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Cabcoco1Q8CDT7 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cabcoco1Q8CDT7 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Cabcoco1Q8CDT7 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cabcoco1Q8CDT7 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cabcoco1Q8CDT7 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cabcoco1Q8CDT7 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Cabcoco1Q8CDT7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.43■□□□□ 0.22
Cabcoco1Q8CDT7 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cabcoco1Q8CDT7 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cabcoco1Q8CDT7 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.43■□□□□ 0.22
Cabcoco1Q8CDT7 Rab3c-203ENSMUST00000224180 967 ntBASIC16.43■□□□□ 0.22
Cabcoco1Q8CDT7 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Cabcoco1Q8CDT7 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cabcoco1Q8CDT7 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cabcoco1Q8CDT7 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cabcoco1Q8CDT7 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cabcoco1Q8CDT7 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cabcoco1Q8CDT7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cabcoco1Q8CDT7 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.43■□□□□ 0.22
Cabcoco1Q8CDT7 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Cabcoco1Q8CDT7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Cabcoco1Q8CDT7 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cabcoco1Q8CDT7 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cabcoco1Q8CDT7 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cabcoco1Q8CDT7 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cabcoco1Q8CDT7 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cabcoco1Q8CDT7 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cabcoco1Q8CDT7 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cabcoco1Q8CDT7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cabcoco1Q8CDT7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Cabcoco1Q8CDT7 Gm26524-201ENSMUST00000192339 390 ntBASIC16.42■□□□□ 0.22
Cabcoco1Q8CDT7 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.42■□□□□ 0.22
Cabcoco1Q8CDT7 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cabcoco1Q8CDT7 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cabcoco1Q8CDT7 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cabcoco1Q8CDT7 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Cabcoco1Q8CDT7 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Cabcoco1Q8CDT7 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cabcoco1Q8CDT7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cabcoco1Q8CDT7 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cabcoco1Q8CDT7 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cabcoco1Q8CDT7 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cabcoco1Q8CDT7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cabcoco1Q8CDT7 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cabcoco1Q8CDT7 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cabcoco1Q8CDT7 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Cabcoco1Q8CDT7 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cabcoco1Q8CDT7 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.42■□□□□ 0.22
Cabcoco1Q8CDT7 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cabcoco1Q8CDT7 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cabcoco1Q8CDT7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cabcoco1Q8CDT7 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cabcoco1Q8CDT7 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cabcoco1Q8CDT7 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cabcoco1Q8CDT7 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cabcoco1Q8CDT7 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Cabcoco1Q8CDT7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Cabcoco1Q8CDT7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cabcoco1Q8CDT7 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cabcoco1Q8CDT7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cabcoco1Q8CDT7 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cabcoco1Q8CDT7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cabcoco1Q8CDT7 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Cabcoco1Q8CDT7 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cabcoco1Q8CDT7 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cabcoco1Q8CDT7 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.41■□□□□ 0.22
Cabcoco1Q8CDT7 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cabcoco1Q8CDT7 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cabcoco1Q8CDT7 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cabcoco1Q8CDT7 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cabcoco1Q8CDT7 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.41■□□□□ 0.22
Cabcoco1Q8CDT7 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cabcoco1Q8CDT7 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cabcoco1Q8CDT7 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cabcoco1Q8CDT7 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cabcoco1Q8CDT7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Cabcoco1Q8CDT7 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cabcoco1Q8CDT7 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cabcoco1Q8CDT7 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cabcoco1Q8CDT7 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cabcoco1Q8CDT7 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cabcoco1Q8CDT7 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cabcoco1Q8CDT7 Gm15375-201ENSMUST00000119510 849 ntBASIC16.4■□□□□ 0.22
Cabcoco1Q8CDT7 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.4■□□□□ 0.22
Cabcoco1Q8CDT7 Gm5408-201ENSMUST00000197998 747 ntBASIC16.4■□□□□ 0.22
Cabcoco1Q8CDT7 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.4■□□□□ 0.22
Cabcoco1Q8CDT7 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cabcoco1Q8CDT7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cabcoco1Q8CDT7 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cabcoco1Q8CDT7 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cabcoco1Q8CDT7 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cabcoco1Q8CDT7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cabcoco1Q8CDT7 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cabcoco1Q8CDT7 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
Cabcoco1Q8CDT7 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cabcoco1Q8CDT7 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cabcoco1Q8CDT7 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms