Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.07□□□□□ -0.16
Nhlrc3Q8CCH2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nhlrc3Q8CCH2 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nhlrc3Q8CCH2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nhlrc3Q8CCH2 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhlrc3Q8CCH2 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhlrc3Q8CCH2 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhlrc3Q8CCH2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhlrc3Q8CCH2 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhlrc3Q8CCH2 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nhlrc3Q8CCH2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhlrc3Q8CCH2 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhlrc3Q8CCH2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhlrc3Q8CCH2 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Nhlrc3Q8CCH2 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhlrc3Q8CCH2 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Nhlrc3Q8CCH2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nhlrc3Q8CCH2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhlrc3Q8CCH2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nhlrc3Q8CCH2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.06□□□□□ -0.16
Nhlrc3Q8CCH2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhlrc3Q8CCH2 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.06□□□□□ -0.16
Nhlrc3Q8CCH2 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhlrc3Q8CCH2 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhlrc3Q8CCH2 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhlrc3Q8CCH2 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhlrc3Q8CCH2 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhlrc3Q8CCH2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhlrc3Q8CCH2 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.06□□□□□ -0.16
Nhlrc3Q8CCH2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhlrc3Q8CCH2 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Nhlrc3Q8CCH2 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Nhlrc3Q8CCH2 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Nhlrc3Q8CCH2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhlrc3Q8CCH2 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhlrc3Q8CCH2 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nhlrc3Q8CCH2 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.05□□□□□ -0.16
Nhlrc3Q8CCH2 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nhlrc3Q8CCH2 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nhlrc3Q8CCH2 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nhlrc3Q8CCH2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Nhlrc3Q8CCH2 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nhlrc3Q8CCH2 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Nhlrc3Q8CCH2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.05□□□□□ -0.16
Nhlrc3Q8CCH2 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Nhlrc3Q8CCH2 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Nhlrc3Q8CCH2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nhlrc3Q8CCH2 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.05□□□□□ -0.16
Nhlrc3Q8CCH2 Gm37856-201ENSMUST00000191634 999 ntBASIC14.05□□□□□ -0.16
Nhlrc3Q8CCH2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nhlrc3Q8CCH2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Nhlrc3Q8CCH2 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nhlrc3Q8CCH2 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Nhlrc3Q8CCH2 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nhlrc3Q8CCH2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc3Q8CCH2 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc3Q8CCH2 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc3Q8CCH2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc3Q8CCH2 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc3Q8CCH2 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc3Q8CCH2 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc3Q8CCH2 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc3Q8CCH2 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.04□□□□□ -0.16
Nhlrc3Q8CCH2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc3Q8CCH2 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Nhlrc3Q8CCH2 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc3Q8CCH2 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc3Q8CCH2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.04□□□□□ -0.16
Nhlrc3Q8CCH2 Trmt13-210ENSMUST00000198454 880 ntBASIC14.04□□□□□ -0.16
Nhlrc3Q8CCH2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc3Q8CCH2 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Nhlrc3Q8CCH2 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc3Q8CCH2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc3Q8CCH2 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc3Q8CCH2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Nhlrc3Q8CCH2 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Nhlrc3Q8CCH2 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Nhlrc3Q8CCH2 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc3Q8CCH2 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc3Q8CCH2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc3Q8CCH2 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc3Q8CCH2 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc3Q8CCH2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc3Q8CCH2 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc3Q8CCH2 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Nhlrc3Q8CCH2 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc3Q8CCH2 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc3Q8CCH2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nhlrc3Q8CCH2 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nhlrc3Q8CCH2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nhlrc3Q8CCH2 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nhlrc3Q8CCH2 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nhlrc3Q8CCH2 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nhlrc3Q8CCH2 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nhlrc3Q8CCH2 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Nhlrc3Q8CCH2 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nhlrc3Q8CCH2 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nhlrc3Q8CCH2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nhlrc3Q8CCH2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nhlrc3Q8CCH2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms