Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf31Q8CCF0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf31Q8CCF0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf31Q8CCF0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf31Q8CCF0 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf31Q8CCF0 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf31Q8CCF0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf31Q8CCF0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf31Q8CCF0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf31Q8CCF0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf31Q8CCF0 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf31Q8CCF0 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf31Q8CCF0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.23■□□□□ 0.51
Prpf31Q8CCF0 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf31Q8CCF0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.23■□□□□ 0.51
Prpf31Q8CCF0 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Prpf31Q8CCF0 Gm9103-201ENSMUST00000119371 405 ntBASIC18.23■□□□□ 0.51
Prpf31Q8CCF0 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.23■□□□□ 0.51
Prpf31Q8CCF0 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf31Q8CCF0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.23■□□□□ 0.51
Prpf31Q8CCF0 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.23■□□□□ 0.51
Prpf31Q8CCF0 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.23■□□□□ 0.51
Prpf31Q8CCF0 Gm18421-201ENSMUST00000204122 625 ntBASIC18.23■□□□□ 0.51
Prpf31Q8CCF0 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf31Q8CCF0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.23■□□□□ 0.51
Prpf31Q8CCF0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf31Q8CCF0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf31Q8CCF0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Prpf31Q8CCF0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf31Q8CCF0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.23■□□□□ 0.51
Prpf31Q8CCF0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf31Q8CCF0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Prpf31Q8CCF0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf31Q8CCF0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.23■□□□□ 0.51
Prpf31Q8CCF0 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf31Q8CCF0 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf31Q8CCF0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf31Q8CCF0 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf31Q8CCF0 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf31Q8CCF0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf31Q8CCF0 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf31Q8CCF0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.22■□□□□ 0.51
Prpf31Q8CCF0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Prpf31Q8CCF0 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.22■□□□□ 0.51
Prpf31Q8CCF0 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.22■□□□□ 0.51
Prpf31Q8CCF0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf31Q8CCF0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Prpf31Q8CCF0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf31Q8CCF0 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf31Q8CCF0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf31Q8CCF0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf31Q8CCF0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf31Q8CCF0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Prpf31Q8CCF0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Prpf31Q8CCF0 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf31Q8CCF0 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Prpf31Q8CCF0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf31Q8CCF0 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.21■□□□□ 0.51
Prpf31Q8CCF0 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf31Q8CCF0 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.21■□□□□ 0.51
Prpf31Q8CCF0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf31Q8CCF0 Gm29707-201ENSMUST00000196325 491 ntBASIC18.21■□□□□ 0.51
Prpf31Q8CCF0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf31Q8CCF0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf31Q8CCF0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf31Q8CCF0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf31Q8CCF0 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.21■□□□□ 0.51
Prpf31Q8CCF0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prpf31Q8CCF0 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
Prpf31Q8CCF0 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf31Q8CCF0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf31Q8CCF0 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf31Q8CCF0 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf31Q8CCF0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf31Q8CCF0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.2■□□□□ 0.5
Prpf31Q8CCF0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.2■□□□□ 0.5
Prpf31Q8CCF0 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.2■□□□□ 0.5
Prpf31Q8CCF0 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf31Q8CCF0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.2■□□□□ 0.5
Prpf31Q8CCF0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf31Q8CCF0 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Prpf31Q8CCF0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf31Q8CCF0 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.2■□□□□ 0.5
Prpf31Q8CCF0 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf31Q8CCF0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prpf31Q8CCF0 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Prpf31Q8CCF0 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.2■□□□□ 0.5
Prpf31Q8CCF0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf31Q8CCF0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf31Q8CCF0 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.19■□□□□ 0.5
Prpf31Q8CCF0 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf31Q8CCF0 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf31Q8CCF0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Prpf31Q8CCF0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Prpf31Q8CCF0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf31Q8CCF0 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf31Q8CCF0 Olfr129-201ENSMUST00000122318 993 ntBASIC18.19■□□□□ 0.5
Prpf31Q8CCF0 Gm17807-201ENSMUST00000186869 298 ntBASIC18.19■□□□□ 0.5
Prpf31Q8CCF0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf31Q8CCF0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms