Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SynpoQ8CC35 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SynpoQ8CC35 Gm21362-201ENSMUST00000194272 928 ntBASIC16.15■□□□□ 0.18
SynpoQ8CC35 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SynpoQ8CC35 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SynpoQ8CC35 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SynpoQ8CC35 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SynpoQ8CC35 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SynpoQ8CC35 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SynpoQ8CC35 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SynpoQ8CC35 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SynpoQ8CC35 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SynpoQ8CC35 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SynpoQ8CC35 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SynpoQ8CC35 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SynpoQ8CC35 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.15■□□□□ 0.18
SynpoQ8CC35 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SynpoQ8CC35 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.18
SynpoQ8CC35 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.14■□□□□ 0.17
SynpoQ8CC35 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SynpoQ8CC35 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SynpoQ8CC35 Gm13474-201ENSMUST00000122466 815 ntBASIC16.14■□□□□ 0.17
SynpoQ8CC35 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SynpoQ8CC35 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SynpoQ8CC35 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
SynpoQ8CC35 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SynpoQ8CC35 Gm7367-201ENSMUST00000057611 492 ntBASIC16.14■□□□□ 0.17
SynpoQ8CC35 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SynpoQ8CC35 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SynpoQ8CC35 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SynpoQ8CC35 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SynpoQ8CC35 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SynpoQ8CC35 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SynpoQ8CC35 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SynpoQ8CC35 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SynpoQ8CC35 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SynpoQ8CC35 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
SynpoQ8CC35 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SynpoQ8CC35 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.13■□□□□ 0.17
SynpoQ8CC35 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SynpoQ8CC35 AA414768-201ENSMUST00000121924 1257 ntBASIC16.13■□□□□ 0.17
SynpoQ8CC35 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SynpoQ8CC35 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.13■□□□□ 0.17
SynpoQ8CC35 Gm22697-201ENSMUST00000175194 63 ntBASIC16.13■□□□□ 0.17
SynpoQ8CC35 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.13■□□□□ 0.17
SynpoQ8CC35 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SynpoQ8CC35 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SynpoQ8CC35 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.13■□□□□ 0.17
SynpoQ8CC35 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SynpoQ8CC35 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SynpoQ8CC35 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SynpoQ8CC35 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SynpoQ8CC35 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SynpoQ8CC35 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SynpoQ8CC35 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SynpoQ8CC35 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SynpoQ8CC35 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SynpoQ8CC35 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SynpoQ8CC35 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SynpoQ8CC35 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SynpoQ8CC35 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SynpoQ8CC35 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.12■□□□□ 0.17
SynpoQ8CC35 Gm7791-201ENSMUST00000219066 539 ntBASIC16.12■□□□□ 0.17
SynpoQ8CC35 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SynpoQ8CC35 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SynpoQ8CC35 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
SynpoQ8CC35 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SynpoQ8CC35 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SynpoQ8CC35 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SynpoQ8CC35 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
SynpoQ8CC35 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SynpoQ8CC35 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SynpoQ8CC35 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SynpoQ8CC35 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SynpoQ8CC35 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SynpoQ8CC35 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SynpoQ8CC35 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.12■□□□□ 0.17
SynpoQ8CC35 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SynpoQ8CC35 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SynpoQ8CC35 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.12■□□□□ 0.17
SynpoQ8CC35 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.11■□□□□ 0.17
SynpoQ8CC35 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SynpoQ8CC35 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SynpoQ8CC35 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SynpoQ8CC35 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SynpoQ8CC35 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SynpoQ8CC35 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.11■□□□□ 0.17
SynpoQ8CC35 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SynpoQ8CC35 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.11■□□□□ 0.17
SynpoQ8CC35 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SynpoQ8CC35 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.11■□□□□ 0.17
SynpoQ8CC35 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.11■□□□□ 0.17
SynpoQ8CC35 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SynpoQ8CC35 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SynpoQ8CC35 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SynpoQ8CC35 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SynpoQ8CC35 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SynpoQ8CC35 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SynpoQ8CC35 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SynpoQ8CC35 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms