Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trim9Q8C7M3 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.4■□□□□ 0.54
Trim9Q8C7M3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Trim9Q8C7M3 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim9Q8C7M3 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim9Q8C7M3 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trim9Q8C7M3 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Trim9Q8C7M3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Trim9Q8C7M3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Trim9Q8C7M3 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.4■□□□□ 0.54
Trim9Q8C7M3 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.4■□□□□ 0.54
Trim9Q8C7M3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim9Q8C7M3 Gm44450-201ENSMUST00000199528 114 ntBASIC18.4■□□□□ 0.54
Trim9Q8C7M3 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.4■□□□□ 0.54
Trim9Q8C7M3 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim9Q8C7M3 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim9Q8C7M3 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim9Q8C7M3 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim9Q8C7M3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trim9Q8C7M3 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim9Q8C7M3 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim9Q8C7M3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim9Q8C7M3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Trim9Q8C7M3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim9Q8C7M3 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Trim9Q8C7M3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Trim9Q8C7M3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim9Q8C7M3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim9Q8C7M3 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.39■□□□□ 0.53
Trim9Q8C7M3 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.39■□□□□ 0.53
Trim9Q8C7M3 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim9Q8C7M3 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.39■□□□□ 0.53
Trim9Q8C7M3 Gm6433-201ENSMUST00000118634 875 ntBASIC18.39■□□□□ 0.53
Trim9Q8C7M3 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.39■□□□□ 0.53
Trim9Q8C7M3 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim9Q8C7M3 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim9Q8C7M3 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Trim9Q8C7M3 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.39■□□□□ 0.53
Trim9Q8C7M3 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim9Q8C7M3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim9Q8C7M3 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Trim9Q8C7M3 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim9Q8C7M3 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim9Q8C7M3 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim9Q8C7M3 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim9Q8C7M3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim9Q8C7M3 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim9Q8C7M3 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim9Q8C7M3 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trim9Q8C7M3 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim9Q8C7M3 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim9Q8C7M3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trim9Q8C7M3 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trim9Q8C7M3 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim9Q8C7M3 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim9Q8C7M3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim9Q8C7M3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trim9Q8C7M3 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim9Q8C7M3 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Trim9Q8C7M3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim9Q8C7M3 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.38■□□□□ 0.53
Trim9Q8C7M3 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim9Q8C7M3 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim9Q8C7M3 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trim9Q8C7M3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.38■□□□□ 0.53
Trim9Q8C7M3 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.38■□□□□ 0.53
Trim9Q8C7M3 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
Trim9Q8C7M3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim9Q8C7M3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trim9Q8C7M3 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim9Q8C7M3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim9Q8C7M3 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Trim9Q8C7M3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim9Q8C7M3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim9Q8C7M3 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim9Q8C7M3 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim9Q8C7M3 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim9Q8C7M3 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim9Q8C7M3 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim9Q8C7M3 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim9Q8C7M3 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim9Q8C7M3 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim9Q8C7M3 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim9Q8C7M3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim9Q8C7M3 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.37■□□□□ 0.53
Trim9Q8C7M3 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim9Q8C7M3 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.37■□□□□ 0.53
Trim9Q8C7M3 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim9Q8C7M3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.37■□□□□ 0.53
Trim9Q8C7M3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim9Q8C7M3 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.37■□□□□ 0.53
Trim9Q8C7M3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim9Q8C7M3 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Trim9Q8C7M3 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim9Q8C7M3 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.37■□□□□ 0.53
Trim9Q8C7M3 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim9Q8C7M3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim9Q8C7M3 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim9Q8C7M3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim9Q8C7M3 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms