Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cps1Q8C196 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC22.41■■□□□ 1.18
Cps1Q8C196 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Cps1Q8C196 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC22.41■■□□□ 1.18
Cps1Q8C196 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cps1Q8C196 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cps1Q8C196 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cps1Q8C196 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cps1Q8C196 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Cps1Q8C196 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cps1Q8C196 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cps1Q8C196 Gm5682-201ENSMUST00000173402 505 ntBASIC22.41■■□□□ 1.18
Cps1Q8C196 Mir6404-201ENSMUST00000183699 94 ntBASIC22.41■■□□□ 1.18
Cps1Q8C196 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC22.41■■□□□ 1.18
Cps1Q8C196 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cps1Q8C196 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC22.41■■□□□ 1.18
Cps1Q8C196 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cps1Q8C196 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Cps1Q8C196 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
Cps1Q8C196 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Cps1Q8C196 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cps1Q8C196 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Cps1Q8C196 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cps1Q8C196 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cps1Q8C196 Gm27646-201ENSMUST00000183989 110 ntBASIC22.4■■□□□ 1.18
Cps1Q8C196 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Cps1Q8C196 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cps1Q8C196 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cps1Q8C196 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cps1Q8C196 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cps1Q8C196 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
Cps1Q8C196 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Cps1Q8C196 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Cps1Q8C196 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Cps1Q8C196 Gm11764-201ENSMUST00000120221 623 ntBASIC22.39■■□□□ 1.17
Cps1Q8C196 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC22.39■■□□□ 1.17
Cps1Q8C196 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Cps1Q8C196 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.17
Cps1Q8C196 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Cps1Q8C196 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Cps1Q8C196 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Cps1Q8C196 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Cps1Q8C196 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cps1Q8C196 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Cps1Q8C196 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Cps1Q8C196 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Cps1Q8C196 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cps1Q8C196 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cps1Q8C196 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Cps1Q8C196 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Cps1Q8C196 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cps1Q8C196 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cps1Q8C196 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cps1Q8C196 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC22.37■■□□□ 1.17
Cps1Q8C196 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cps1Q8C196 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Cps1Q8C196 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Cps1Q8C196 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cps1Q8C196 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Cps1Q8C196 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cps1Q8C196 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cps1Q8C196 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cps1Q8C196 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cps1Q8C196 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC22.37■■□□□ 1.17
Cps1Q8C196 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cps1Q8C196 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Cps1Q8C196 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC22.36■■□□□ 1.17
Cps1Q8C196 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cps1Q8C196 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cps1Q8C196 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cps1Q8C196 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cps1Q8C196 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC22.36■■□□□ 1.17
Cps1Q8C196 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cps1Q8C196 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Cps1Q8C196 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.36■■□□□ 1.17
Cps1Q8C196 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cps1Q8C196 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cps1Q8C196 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cps1Q8C196 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC22.36■■□□□ 1.17
Cps1Q8C196 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC22.36■■□□□ 1.17
Cps1Q8C196 AC090659.1-201ENSMUST00000224334 768 ntBASIC22.36■■□□□ 1.17
Cps1Q8C196 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cps1Q8C196 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cps1Q8C196 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Cps1Q8C196 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Cps1Q8C196 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Cps1Q8C196 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cps1Q8C196 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC22.35■■□□□ 1.17
Cps1Q8C196 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
Cps1Q8C196 Gm8655-201ENSMUST00000221159 852 ntBASIC22.35■■□□□ 1.17
Cps1Q8C196 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC22.35■■□□□ 1.17
Cps1Q8C196 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cps1Q8C196 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cps1Q8C196 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cps1Q8C196 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC22.34■■□□□ 1.17
Cps1Q8C196 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC22.34■■□□□ 1.17
Cps1Q8C196 Gm37519-201ENSMUST00000191687 2210 ntBASIC22.34■■□□□ 1.17
Cps1Q8C196 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cps1Q8C196 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Cps1Q8C196 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms