Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps9d1Q8C190 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps9d1Q8C190 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps9d1Q8C190 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.64■□□□□ 0.09
Vps9d1Q8C190 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps9d1Q8C190 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps9d1Q8C190 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.64■□□□□ 0.09
Vps9d1Q8C190 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps9d1Q8C190 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps9d1Q8C190 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vps9d1Q8C190 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.63■□□□□ 0.09
Vps9d1Q8C190 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps9d1Q8C190 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps9d1Q8C190 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.63■□□□□ 0.09
Vps9d1Q8C190 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps9d1Q8C190 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.63■□□□□ 0.09
Vps9d1Q8C190 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps9d1Q8C190 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps9d1Q8C190 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.63■□□□□ 0.09
Vps9d1Q8C190 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.63■□□□□ 0.09
Vps9d1Q8C190 Gm4974-201ENSMUST00000209974 875 ntBASIC15.63■□□□□ 0.09
Vps9d1Q8C190 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.63■□□□□ 0.09
Vps9d1Q8C190 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vps9d1Q8C190 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps9d1Q8C190 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps9d1Q8C190 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps9d1Q8C190 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps9d1Q8C190 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.63■□□□□ 0.09
Vps9d1Q8C190 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vps9d1Q8C190 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps9d1Q8C190 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps9d1Q8C190 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Vps9d1Q8C190 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vps9d1Q8C190 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Vps9d1Q8C190 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps9d1Q8C190 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps9d1Q8C190 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps9d1Q8C190 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.63■□□□□ 0.09
Vps9d1Q8C190 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps9d1Q8C190 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps9d1Q8C190 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps9d1Q8C190 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps9d1Q8C190 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Vps9d1Q8C190 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps9d1Q8C190 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vps9d1Q8C190 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Vps9d1Q8C190 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.62■□□□□ 0.09
Vps9d1Q8C190 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.62■□□□□ 0.09
Vps9d1Q8C190 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.62■□□□□ 0.09
Vps9d1Q8C190 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.62■□□□□ 0.09
Vps9d1Q8C190 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Vps9d1Q8C190 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps9d1Q8C190 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps9d1Q8C190 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vps9d1Q8C190 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.62■□□□□ 0.09
Vps9d1Q8C190 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.62■□□□□ 0.09
Vps9d1Q8C190 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps9d1Q8C190 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Vps9d1Q8C190 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps9d1Q8C190 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vps9d1Q8C190 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps9d1Q8C190 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Vps9d1Q8C190 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps9d1Q8C190 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps9d1Q8C190 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps9d1Q8C190 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps9d1Q8C190 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vps9d1Q8C190 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps9d1Q8C190 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Vps9d1Q8C190 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vps9d1Q8C190 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.61■□□□□ 0.09
Vps9d1Q8C190 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps9d1Q8C190 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.61■□□□□ 0.09
Vps9d1Q8C190 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps9d1Q8C190 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps9d1Q8C190 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Vps9d1Q8C190 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps9d1Q8C190 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.61■□□□□ 0.09
Vps9d1Q8C190 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.61■□□□□ 0.09
Vps9d1Q8C190 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Vps9d1Q8C190 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps9d1Q8C190 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps9d1Q8C190 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Vps9d1Q8C190 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.6■□□□□ 0.09
Vps9d1Q8C190 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps9d1Q8C190 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Vps9d1Q8C190 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vps9d1Q8C190 Mir6982-201ENSMUST00000184354 68 ntBASIC15.6■□□□□ 0.09
Vps9d1Q8C190 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps9d1Q8C190 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.6■□□□□ 0.09
Vps9d1Q8C190 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps9d1Q8C190 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vps9d1Q8C190 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps9d1Q8C190 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vps9d1Q8C190 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps9d1Q8C190 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps9d1Q8C190 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vps9d1Q8C190 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps9d1Q8C190 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Vps9d1Q8C190 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms