Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3rf3Q8C120 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3rf3Q8C120 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3rf3Q8C120 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3rf3Q8C120 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3rf3Q8C120 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Sh3rf3Q8C120 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.37■□□□□ 0.37
Sh3rf3Q8C120 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3rf3Q8C120 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3rf3Q8C120 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3rf3Q8C120 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3rf3Q8C120 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3rf3Q8C120 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3rf3Q8C120 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3rf3Q8C120 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.37■□□□□ 0.37
Sh3rf3Q8C120 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3rf3Q8C120 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.37■□□□□ 0.37
Sh3rf3Q8C120 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3rf3Q8C120 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3rf3Q8C120 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3rf3Q8C120 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Sh3rf3Q8C120 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3rf3Q8C120 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3rf3Q8C120 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3rf3Q8C120 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3rf3Q8C120 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.37■□□□□ 0.37
Sh3rf3Q8C120 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.37■□□□□ 0.37
Sh3rf3Q8C120 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3rf3Q8C120 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3rf3Q8C120 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf3Q8C120 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf3Q8C120 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.36■□□□□ 0.37
Sh3rf3Q8C120 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf3Q8C120 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf3Q8C120 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf3Q8C120 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf3Q8C120 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf3Q8C120 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf3Q8C120 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf3Q8C120 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf3Q8C120 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf3Q8C120 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf3Q8C120 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
Sh3rf3Q8C120 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf3Q8C120 Gm2274-201ENSMUST00000184539 609 ntBASIC17.36■□□□□ 0.37
Sh3rf3Q8C120 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf3Q8C120 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf3Q8C120 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf3Q8C120 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Sh3rf3Q8C120 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf3Q8C120 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf3Q8C120 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf3Q8C120 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf3Q8C120 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf3Q8C120 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf3Q8C120 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3rf3Q8C120 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Sh3rf3Q8C120 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.36■□□□□ 0.37
Sh3rf3Q8C120 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Sh3rf3Q8C120 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.35■□□□□ 0.37
Sh3rf3Q8C120 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3rf3Q8C120 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3rf3Q8C120 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3rf3Q8C120 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3rf3Q8C120 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3rf3Q8C120 Gm13216-201ENSMUST00000117145 591 ntBASIC17.35■□□□□ 0.37
Sh3rf3Q8C120 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3rf3Q8C120 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.35■□□□□ 0.37
Sh3rf3Q8C120 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.35■□□□□ 0.37
Sh3rf3Q8C120 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Sh3rf3Q8C120 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.35■□□□□ 0.37
Sh3rf3Q8C120 Gm10566-201ENSMUST00000086739 996 ntBASIC17.35■□□□□ 0.37
Sh3rf3Q8C120 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3rf3Q8C120 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3rf3Q8C120 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3rf3Q8C120 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3rf3Q8C120 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3rf3Q8C120 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3rf3Q8C120 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.35■□□□□ 0.37
Sh3rf3Q8C120 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3rf3Q8C120 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3rf3Q8C120 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3rf3Q8C120 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3rf3Q8C120 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3rf3Q8C120 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.34■□□□□ 0.37
Sh3rf3Q8C120 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.34■□□□□ 0.37
Sh3rf3Q8C120 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.34■□□□□ 0.37
Sh3rf3Q8C120 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3rf3Q8C120 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3rf3Q8C120 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.34■□□□□ 0.37
Sh3rf3Q8C120 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3rf3Q8C120 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Sh3rf3Q8C120 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3rf3Q8C120 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3rf3Q8C120 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3rf3Q8C120 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3rf3Q8C120 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3rf3Q8C120 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Sh3rf3Q8C120 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3rf3Q8C120 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms