Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.47■□□□□ 0.55
Trim47Q8C0E3 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim47Q8C0E3 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Trim47Q8C0E3 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim47Q8C0E3 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim47Q8C0E3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim47Q8C0E3 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim47Q8C0E3 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim47Q8C0E3 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.47■□□□□ 0.55
Trim47Q8C0E3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.47■□□□□ 0.55
Trim47Q8C0E3 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim47Q8C0E3 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim47Q8C0E3 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim47Q8C0E3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim47Q8C0E3 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Trim47Q8C0E3 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim47Q8C0E3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Trim47Q8C0E3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim47Q8C0E3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim47Q8C0E3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim47Q8C0E3 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim47Q8C0E3 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim47Q8C0E3 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim47Q8C0E3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim47Q8C0E3 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.47■□□□□ 0.55
Trim47Q8C0E3 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim47Q8C0E3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim47Q8C0E3 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.46■□□□□ 0.55
Trim47Q8C0E3 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim47Q8C0E3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim47Q8C0E3 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim47Q8C0E3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.46■□□□□ 0.55
Trim47Q8C0E3 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim47Q8C0E3 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim47Q8C0E3 Gm45328-201ENSMUST00000210942 917 ntBASIC18.46■□□□□ 0.55
Trim47Q8C0E3 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim47Q8C0E3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim47Q8C0E3 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.46■□□□□ 0.55
Trim47Q8C0E3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim47Q8C0E3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim47Q8C0E3 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim47Q8C0E3 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Trim47Q8C0E3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Trim47Q8C0E3 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim47Q8C0E3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim47Q8C0E3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim47Q8C0E3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim47Q8C0E3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.45■□□□□ 0.54
Trim47Q8C0E3 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim47Q8C0E3 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim47Q8C0E3 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim47Q8C0E3 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim47Q8C0E3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim47Q8C0E3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Trim47Q8C0E3 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim47Q8C0E3 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim47Q8C0E3 Olfr129-201ENSMUST00000122318 993 ntBASIC18.45■□□□□ 0.54
Trim47Q8C0E3 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.45■□□□□ 0.54
Trim47Q8C0E3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.45■□□□□ 0.54
Trim47Q8C0E3 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.45■□□□□ 0.54
Trim47Q8C0E3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim47Q8C0E3 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim47Q8C0E3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim47Q8C0E3 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim47Q8C0E3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Trim47Q8C0E3 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim47Q8C0E3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim47Q8C0E3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim47Q8C0E3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.45■□□□□ 0.54
Trim47Q8C0E3 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim47Q8C0E3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Trim47Q8C0E3 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim47Q8C0E3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.45■□□□□ 0.54
Trim47Q8C0E3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim47Q8C0E3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim47Q8C0E3 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trim47Q8C0E3 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Trim47Q8C0E3 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim47Q8C0E3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim47Q8C0E3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim47Q8C0E3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim47Q8C0E3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim47Q8C0E3 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim47Q8C0E3 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim47Q8C0E3 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim47Q8C0E3 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim47Q8C0E3 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim47Q8C0E3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim47Q8C0E3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim47Q8C0E3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim47Q8C0E3 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trim47Q8C0E3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim47Q8C0E3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim47Q8C0E3 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim47Q8C0E3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Trim47Q8C0E3 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim47Q8C0E3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim47Q8C0E3 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim47Q8C0E3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Trim47Q8C0E3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms