Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Usp40Q8BWR4 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC22.82■■□□□ 1.24
Usp40Q8BWR4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Usp40Q8BWR4 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Usp40Q8BWR4 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Usp40Q8BWR4 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Usp40Q8BWR4 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Usp40Q8BWR4 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
Usp40Q8BWR4 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC22.82■■□□□ 1.24
Usp40Q8BWR4 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Usp40Q8BWR4 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC22.82■■□□□ 1.24
Usp40Q8BWR4 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC22.82■■□□□ 1.24
Usp40Q8BWR4 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC22.82■■□□□ 1.24
Usp40Q8BWR4 CT009713.7-201ENSMUST00000224689 571 ntBASIC22.82■■□□□ 1.24
Usp40Q8BWR4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Usp40Q8BWR4 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Usp40Q8BWR4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Usp40Q8BWR4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Usp40Q8BWR4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
Usp40Q8BWR4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Usp40Q8BWR4 Gm9889-202ENSMUST00000206983 1577 ntBASIC22.81■■□□□ 1.24
Usp40Q8BWR4 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Usp40Q8BWR4 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC22.81■■□□□ 1.24
Usp40Q8BWR4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC22.81■■□□□ 1.24
Usp40Q8BWR4 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Usp40Q8BWR4 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
Usp40Q8BWR4 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC22.81■■□□□ 1.24
Usp40Q8BWR4 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Usp40Q8BWR4 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
Usp40Q8BWR4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Usp40Q8BWR4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Usp40Q8BWR4 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Usp40Q8BWR4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Usp40Q8BWR4 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Usp40Q8BWR4 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC22.81■■□□□ 1.24
Usp40Q8BWR4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Usp40Q8BWR4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC22.81■■□□□ 1.24
Usp40Q8BWR4 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Usp40Q8BWR4 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC22.8■■□□□ 1.24
Usp40Q8BWR4 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Usp40Q8BWR4 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Usp40Q8BWR4 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC22.8■■□□□ 1.24
Usp40Q8BWR4 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC22.8■■□□□ 1.24
Usp40Q8BWR4 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC22.8■■□□□ 1.24
Usp40Q8BWR4 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC22.8■■□□□ 1.24
Usp40Q8BWR4 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Usp40Q8BWR4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Usp40Q8BWR4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Usp40Q8BWR4 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
Usp40Q8BWR4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Usp40Q8BWR4 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Usp40Q8BWR4 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Usp40Q8BWR4 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Usp40Q8BWR4 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
Usp40Q8BWR4 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
Usp40Q8BWR4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Usp40Q8BWR4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC22.79■■□□□ 1.24
Usp40Q8BWR4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Usp40Q8BWR4 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC22.79■■□□□ 1.24
Usp40Q8BWR4 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC22.79■■□□□ 1.24
Usp40Q8BWR4 Gm6296-201ENSMUST00000222599 943 ntBASIC22.79■■□□□ 1.24
Usp40Q8BWR4 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Usp40Q8BWR4 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Usp40Q8BWR4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Usp40Q8BWR4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Usp40Q8BWR4 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Usp40Q8BWR4 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Usp40Q8BWR4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Usp40Q8BWR4 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC22.78■■□□□ 1.24
Usp40Q8BWR4 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
Usp40Q8BWR4 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
Usp40Q8BWR4 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC22.78■■□□□ 1.24
Usp40Q8BWR4 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Usp40Q8BWR4 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Usp40Q8BWR4 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC22.78■■□□□ 1.24
Usp40Q8BWR4 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Usp40Q8BWR4 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Usp40Q8BWR4 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Usp40Q8BWR4 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Usp40Q8BWR4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Usp40Q8BWR4 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Usp40Q8BWR4 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
Usp40Q8BWR4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Usp40Q8BWR4 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Usp40Q8BWR4 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Usp40Q8BWR4 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Usp40Q8BWR4 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC22.77■■□□□ 1.24
Usp40Q8BWR4 Gm44357-201ENSMUST00000195897 142 ntBASIC22.77■■□□□ 1.24
Usp40Q8BWR4 Gm19658-201ENSMUST00000196231 138 ntBASIC22.77■■□□□ 1.24
Usp40Q8BWR4 Gm44367-201ENSMUST00000196836 138 ntBASIC22.77■■□□□ 1.24
Usp40Q8BWR4 Gm44350-201ENSMUST00000197197 138 ntBASIC22.77■■□□□ 1.24
Usp40Q8BWR4 Gm44390-201ENSMUST00000197533 144 ntBASIC22.77■■□□□ 1.24
Usp40Q8BWR4 Gm44313-201ENSMUST00000198018 138 ntBASIC22.77■■□□□ 1.24
Usp40Q8BWR4 Gm44486-201ENSMUST00000198508 138 ntBASIC22.77■■□□□ 1.24
Usp40Q8BWR4 Gm44314-201ENSMUST00000199263 138 ntBASIC22.77■■□□□ 1.24
Usp40Q8BWR4 Gm44394-201ENSMUST00000199558 138 ntBASIC22.77■■□□□ 1.24
Usp40Q8BWR4 Gm44484-201ENSMUST00000199873 138 ntBASIC22.77■■□□□ 1.24
Usp40Q8BWR4 Gm44466-201ENSMUST00000200264 138 ntBASIC22.77■■□□□ 1.24
Usp40Q8BWR4 Gm44359-201ENSMUST00000200671 138 ntBASIC22.77■■□□□ 1.24
Usp40Q8BWR4 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC22.77■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms