Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fam43aQ8BUP8 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fam43aQ8BUP8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fam43aQ8BUP8 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fam43aQ8BUP8 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Fam43aQ8BUP8 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam43aQ8BUP8 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam43aQ8BUP8 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.61■□□□□ 0.57
Fam43aQ8BUP8 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam43aQ8BUP8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam43aQ8BUP8 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Fam43aQ8BUP8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam43aQ8BUP8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam43aQ8BUP8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Fam43aQ8BUP8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.61■□□□□ 0.57
Fam43aQ8BUP8 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.61■□□□□ 0.57
Fam43aQ8BUP8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.61■□□□□ 0.57
Fam43aQ8BUP8 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam43aQ8BUP8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam43aQ8BUP8 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam43aQ8BUP8 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam43aQ8BUP8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam43aQ8BUP8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam43aQ8BUP8 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam43aQ8BUP8 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Fam43aQ8BUP8 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam43aQ8BUP8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam43aQ8BUP8 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam43aQ8BUP8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam43aQ8BUP8 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Fam43aQ8BUP8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.6■□□□□ 0.57
Fam43aQ8BUP8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam43aQ8BUP8 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam43aQ8BUP8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam43aQ8BUP8 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Fam43aQ8BUP8 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam43aQ8BUP8 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
Fam43aQ8BUP8 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam43aQ8BUP8 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Fam43aQ8BUP8 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Fam43aQ8BUP8 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fam43aQ8BUP8 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.59■□□□□ 0.57
Fam43aQ8BUP8 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Fam43aQ8BUP8 Gm8520-201ENSMUST00000186517 868 ntBASIC18.59■□□□□ 0.57
Fam43aQ8BUP8 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.59■□□□□ 0.57
Fam43aQ8BUP8 Gm8969-201ENSMUST00000199694 526 ntBASIC18.59■□□□□ 0.57
Fam43aQ8BUP8 Gm18025-201ENSMUST00000221733 862 ntBASIC18.59■□□□□ 0.57
Fam43aQ8BUP8 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fam43aQ8BUP8 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fam43aQ8BUP8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fam43aQ8BUP8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.59■□□□□ 0.57
Fam43aQ8BUP8 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
Fam43aQ8BUP8 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Fam43aQ8BUP8 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.59■□□□□ 0.57
Fam43aQ8BUP8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Fam43aQ8BUP8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.59■□□□□ 0.57
Fam43aQ8BUP8 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Fam43aQ8BUP8 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Fam43aQ8BUP8 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Fam43aQ8BUP8 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Fam43aQ8BUP8 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Fam43aQ8BUP8 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Fam43aQ8BUP8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Fam43aQ8BUP8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Fam43aQ8BUP8 Gm22240-201ENSMUST00000175225 82 ntBASIC18.58■□□□□ 0.56
Fam43aQ8BUP8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.58■□□□□ 0.56
Fam43aQ8BUP8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.58■□□□□ 0.56
Fam43aQ8BUP8 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Fam43aQ8BUP8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Fam43aQ8BUP8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Fam43aQ8BUP8 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC18.58■□□□□ 0.56
Fam43aQ8BUP8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Fam43aQ8BUP8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Fam43aQ8BUP8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Fam43aQ8BUP8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam43aQ8BUP8 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Fam43aQ8BUP8 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam43aQ8BUP8 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Fam43aQ8BUP8 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC18.57■□□□□ 0.56
Fam43aQ8BUP8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam43aQ8BUP8 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Fam43aQ8BUP8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam43aQ8BUP8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam43aQ8BUP8 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Fam43aQ8BUP8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Fam43aQ8BUP8 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam43aQ8BUP8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.57■□□□□ 0.56
Fam43aQ8BUP8 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam43aQ8BUP8 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam43aQ8BUP8 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Fam43aQ8BUP8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam43aQ8BUP8 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Fam43aQ8BUP8 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam43aQ8BUP8 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam43aQ8BUP8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Fam43aQ8BUP8 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fam43aQ8BUP8 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC18.56■□□□□ 0.56
Fam43aQ8BUP8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fam43aQ8BUP8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fam43aQ8BUP8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms