Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Cdhr3Q8BL00 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cdhr3Q8BL00 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Cdhr3Q8BL00 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdhr3Q8BL00 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Cdhr3Q8BL00 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdhr3Q8BL00 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdhr3Q8BL00 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdhr3Q8BL00 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdhr3Q8BL00 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdhr3Q8BL00 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdhr3Q8BL00 Trmt13-210ENSMUST00000198454 880 ntBASIC14.58□□□□□ -0.08
Cdhr3Q8BL00 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdhr3Q8BL00 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdhr3Q8BL00 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdhr3Q8BL00 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdhr3Q8BL00 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Cdhr3Q8BL00 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdhr3Q8BL00 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdhr3Q8BL00 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdhr3Q8BL00 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdhr3Q8BL00 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdhr3Q8BL00 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdhr3Q8BL00 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdhr3Q8BL00 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdhr3Q8BL00 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cdhr3Q8BL00 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cdhr3Q8BL00 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.57□□□□□ -0.08
Cdhr3Q8BL00 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdhr3Q8BL00 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdhr3Q8BL00 Gm9731-201ENSMUST00000209480 747 ntBASIC14.57□□□□□ -0.08
Cdhr3Q8BL00 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cdhr3Q8BL00 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdhr3Q8BL00 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdhr3Q8BL00 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdhr3Q8BL00 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdhr3Q8BL00 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdhr3Q8BL00 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
Cdhr3Q8BL00 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdhr3Q8BL00 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.57□□□□□ -0.08
Cdhr3Q8BL00 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdhr3Q8BL00 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdhr3Q8BL00 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cdhr3Q8BL00 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.57□□□□□ -0.08
Cdhr3Q8BL00 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdhr3Q8BL00 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Cdhr3Q8BL00 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdhr3Q8BL00 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdhr3Q8BL00 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdhr3Q8BL00 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdhr3Q8BL00 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
Cdhr3Q8BL00 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdhr3Q8BL00 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Cdhr3Q8BL00 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdhr3Q8BL00 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdhr3Q8BL00 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdhr3Q8BL00 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.56□□□□□ -0.08
Cdhr3Q8BL00 Gm12527-201ENSMUST00000117967 564 ntBASIC14.56□□□□□ -0.08
Cdhr3Q8BL00 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.56□□□□□ -0.08
Cdhr3Q8BL00 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdhr3Q8BL00 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdhr3Q8BL00 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdhr3Q8BL00 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdhr3Q8BL00 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdhr3Q8BL00 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdhr3Q8BL00 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdhr3Q8BL00 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdhr3Q8BL00 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdhr3Q8BL00 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdhr3Q8BL00 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.56□□□□□ -0.08
Cdhr3Q8BL00 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Cdhr3Q8BL00 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdhr3Q8BL00 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cdhr3Q8BL00 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdhr3Q8BL00 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdhr3Q8BL00 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdhr3Q8BL00 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cdhr3Q8BL00 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.55□□□□□ -0.08
Cdhr3Q8BL00 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdhr3Q8BL00 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdhr3Q8BL00 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdhr3Q8BL00 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdhr3Q8BL00 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdhr3Q8BL00 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdhr3Q8BL00 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Cdhr3Q8BL00 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdhr3Q8BL00 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdhr3Q8BL00 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdhr3Q8BL00 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdhr3Q8BL00 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdhr3Q8BL00 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdhr3Q8BL00 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Cdhr3Q8BL00 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdhr3Q8BL00 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdhr3Q8BL00 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdhr3Q8BL00 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cdhr3Q8BL00 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.55□□□□□ -0.08
Cdhr3Q8BL00 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdhr3Q8BL00 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdhr3Q8BL00 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms