Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Depdc1bQ8BH88 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Depdc1bQ8BH88 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.14■□□□□ 0.49
Depdc1bQ8BH88 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Depdc1bQ8BH88 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Depdc1bQ8BH88 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Depdc1bQ8BH88 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Depdc1bQ8BH88 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Depdc1bQ8BH88 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Depdc1bQ8BH88 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Depdc1bQ8BH88 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Depdc1bQ8BH88 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Depdc1bQ8BH88 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Depdc1bQ8BH88 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Depdc1bQ8BH88 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Depdc1bQ8BH88 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
Depdc1bQ8BH88 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Depdc1bQ8BH88 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Depdc1bQ8BH88 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Depdc1bQ8BH88 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Depdc1bQ8BH88 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Depdc1bQ8BH88 Gm10013-201ENSMUST00000106074 672 ntBASIC18.13■□□□□ 0.49
Depdc1bQ8BH88 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Depdc1bQ8BH88 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Depdc1bQ8BH88 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Depdc1bQ8BH88 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.13■□□□□ 0.49
Depdc1bQ8BH88 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Depdc1bQ8BH88 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Depdc1bQ8BH88 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Depdc1bQ8BH88 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Depdc1bQ8BH88 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Depdc1bQ8BH88 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Depdc1bQ8BH88 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Depdc1bQ8BH88 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Depdc1bQ8BH88 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Depdc1bQ8BH88 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.13■□□□□ 0.49
Depdc1bQ8BH88 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.12■□□□□ 0.49
Depdc1bQ8BH88 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Depdc1bQ8BH88 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Depdc1bQ8BH88 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Depdc1bQ8BH88 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.12■□□□□ 0.49
Depdc1bQ8BH88 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.12■□□□□ 0.49
Depdc1bQ8BH88 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Depdc1bQ8BH88 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.12■□□□□ 0.49
Depdc1bQ8BH88 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.12■□□□□ 0.49
Depdc1bQ8BH88 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Depdc1bQ8BH88 Gm18032-201ENSMUST00000222541 538 ntBASIC18.12■□□□□ 0.49
Depdc1bQ8BH88 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.12■□□□□ 0.49
Depdc1bQ8BH88 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Depdc1bQ8BH88 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Depdc1bQ8BH88 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Depdc1bQ8BH88 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.12■□□□□ 0.49
Depdc1bQ8BH88 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Depdc1bQ8BH88 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Depdc1bQ8BH88 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Depdc1bQ8BH88 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Depdc1bQ8BH88 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Depdc1bQ8BH88 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Depdc1bQ8BH88 Mir5130-201ENSMUST00000175160 84 ntBASIC18.11■□□□□ 0.49
Depdc1bQ8BH88 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.11■□□□□ 0.49
Depdc1bQ8BH88 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Depdc1bQ8BH88 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.11■□□□□ 0.49
Depdc1bQ8BH88 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.11■□□□□ 0.49
Depdc1bQ8BH88 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Depdc1bQ8BH88 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Depdc1bQ8BH88 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Depdc1bQ8BH88 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Depdc1bQ8BH88 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Depdc1bQ8BH88 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Depdc1bQ8BH88 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Depdc1bQ8BH88 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Depdc1bQ8BH88 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Depdc1bQ8BH88 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Depdc1bQ8BH88 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Depdc1bQ8BH88 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Depdc1bQ8BH88 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Depdc1bQ8BH88 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.1■□□□□ 0.49
Depdc1bQ8BH88 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Depdc1bQ8BH88 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Depdc1bQ8BH88 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Depdc1bQ8BH88 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Depdc1bQ8BH88 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Depdc1bQ8BH88 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Depdc1bQ8BH88 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Depdc1bQ8BH88 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Depdc1bQ8BH88 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Depdc1bQ8BH88 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Depdc1bQ8BH88 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Depdc1bQ8BH88 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Depdc1bQ8BH88 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Depdc1bQ8BH88 Gm13216-201ENSMUST00000117145 591 ntBASIC18.09■□□□□ 0.49
Depdc1bQ8BH88 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Depdc1bQ8BH88 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.09■□□□□ 0.49
Depdc1bQ8BH88 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Depdc1bQ8BH88 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Depdc1bQ8BH88 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Depdc1bQ8BH88 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Depdc1bQ8BH88 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Depdc1bQ8BH88 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Depdc1bQ8BH88 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms