Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim6Q8BGE7 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim6Q8BGE7 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim6Q8BGE7 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim6Q8BGE7 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim6Q8BGE7 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim6Q8BGE7 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.75■□□□□ 0.43
Trim6Q8BGE7 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim6Q8BGE7 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim6Q8BGE7 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim6Q8BGE7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim6Q8BGE7 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim6Q8BGE7 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim6Q8BGE7 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim6Q8BGE7 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim6Q8BGE7 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim6Q8BGE7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim6Q8BGE7 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim6Q8BGE7 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim6Q8BGE7 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim6Q8BGE7 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim6Q8BGE7 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim6Q8BGE7 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim6Q8BGE7 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim6Q8BGE7 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Trim6Q8BGE7 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim6Q8BGE7 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim6Q8BGE7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim6Q8BGE7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim6Q8BGE7 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.73■□□□□ 0.43
Trim6Q8BGE7 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim6Q8BGE7 Gm18025-201ENSMUST00000221733 862 ntBASIC17.73■□□□□ 0.43
Trim6Q8BGE7 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim6Q8BGE7 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.73■□□□□ 0.43
Trim6Q8BGE7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim6Q8BGE7 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim6Q8BGE7 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim6Q8BGE7 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim6Q8BGE7 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim6Q8BGE7 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
Trim6Q8BGE7 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim6Q8BGE7 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.73■□□□□ 0.43
Trim6Q8BGE7 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim6Q8BGE7 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim6Q8BGE7 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim6Q8BGE7 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim6Q8BGE7 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim6Q8BGE7 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Trim6Q8BGE7 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trim6Q8BGE7 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim6Q8BGE7 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim6Q8BGE7 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim6Q8BGE7 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim6Q8BGE7 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.72■□□□□ 0.43
Trim6Q8BGE7 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.72■□□□□ 0.43
Trim6Q8BGE7 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.72■□□□□ 0.43
Trim6Q8BGE7 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Trim6Q8BGE7 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.72■□□□□ 0.43
Trim6Q8BGE7 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim6Q8BGE7 Gm4974-201ENSMUST00000209974 875 ntBASIC17.72■□□□□ 0.43
Trim6Q8BGE7 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim6Q8BGE7 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trim6Q8BGE7 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim6Q8BGE7 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim6Q8BGE7 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.72■□□□□ 0.43
Trim6Q8BGE7 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim6Q8BGE7 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim6Q8BGE7 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trim6Q8BGE7 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim6Q8BGE7 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.71■□□□□ 0.43
Trim6Q8BGE7 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Trim6Q8BGE7 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim6Q8BGE7 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim6Q8BGE7 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.71■□□□□ 0.43
Trim6Q8BGE7 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim6Q8BGE7 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim6Q8BGE7 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim6Q8BGE7 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim6Q8BGE7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim6Q8BGE7 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.42
Trim6Q8BGE7 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trim6Q8BGE7 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.71■□□□□ 0.42
Trim6Q8BGE7 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trim6Q8BGE7 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Trim6Q8BGE7 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim6Q8BGE7 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim6Q8BGE7 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim6Q8BGE7 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim6Q8BGE7 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim6Q8BGE7 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim6Q8BGE7 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.7■□□□□ 0.42
Trim6Q8BGE7 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.7■□□□□ 0.42
Trim6Q8BGE7 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.7■□□□□ 0.42
Trim6Q8BGE7 Gm42545-201ENSMUST00000202755 922 ntBASIC17.7■□□□□ 0.42
Trim6Q8BGE7 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.7■□□□□ 0.42
Trim6Q8BGE7 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim6Q8BGE7 Gm10602-201ENSMUST00000098239 609 ntBASIC17.7■□□□□ 0.42
Trim6Q8BGE7 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Trim6Q8BGE7 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim6Q8BGE7 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms