Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Mir7071-201ENSMUST00000184847 69 ntBASIC16.26■□□□□ 0.19
Trim50Q810I2 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.26■□□□□ 0.19
Trim50Q810I2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim50Q810I2 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim50Q810I2 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim50Q810I2 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim50Q810I2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim50Q810I2 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.26■□□□□ 0.19
Trim50Q810I2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trim50Q810I2 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Trim50Q810I2 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim50Q810I2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim50Q810I2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim50Q810I2 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim50Q810I2 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trim50Q810I2 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trim50Q810I2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim50Q810I2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trim50Q810I2 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim50Q810I2 Gm13474-201ENSMUST00000122466 815 ntBASIC16.25■□□□□ 0.19
Trim50Q810I2 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trim50Q810I2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.25■□□□□ 0.19
Trim50Q810I2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trim50Q810I2 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.25■□□□□ 0.19
Trim50Q810I2 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim50Q810I2 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim50Q810I2 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim50Q810I2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.25■□□□□ 0.19
Trim50Q810I2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim50Q810I2 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim50Q810I2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim50Q810I2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Trim50Q810I2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim50Q810I2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim50Q810I2 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.24■□□□□ 0.19
Trim50Q810I2 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim50Q810I2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim50Q810I2 Gm6433-201ENSMUST00000118634 875 ntBASIC16.24■□□□□ 0.19
Trim50Q810I2 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.24■□□□□ 0.19
Trim50Q810I2 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.24■□□□□ 0.19
Trim50Q810I2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim50Q810I2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim50Q810I2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim50Q810I2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim50Q810I2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim50Q810I2 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim50Q810I2 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim50Q810I2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim50Q810I2 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim50Q810I2 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim50Q810I2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim50Q810I2 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim50Q810I2 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim50Q810I2 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim50Q810I2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trim50Q810I2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim50Q810I2 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim50Q810I2 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim50Q810I2 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim50Q810I2 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim50Q810I2 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim50Q810I2 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim50Q810I2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim50Q810I2 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim50Q810I2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim50Q810I2 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim50Q810I2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim50Q810I2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim50Q810I2 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim50Q810I2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.23■□□□□ 0.19
Trim50Q810I2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.23■□□□□ 0.19
Trim50Q810I2 Gm45058-201ENSMUST00000205810 766 ntBASIC16.23■□□□□ 0.19
Trim50Q810I2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.23■□□□□ 0.19
Trim50Q810I2 Gm18959-201ENSMUST00000208954 655 ntBASIC16.23■□□□□ 0.19
Trim50Q810I2 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.23■□□□□ 0.19
Trim50Q810I2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim50Q810I2 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim50Q810I2 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim50Q810I2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Trim50Q810I2 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim50Q810I2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim50Q810I2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim50Q810I2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Trim50Q810I2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim50Q810I2 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim50Q810I2 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim50Q810I2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim50Q810I2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim50Q810I2 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim50Q810I2 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim50Q810I2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim50Q810I2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim50Q810I2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim50Q810I2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim50Q810I2 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim50Q810I2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim50Q810I2 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim50Q810I2 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim50Q810I2 Mir5130-201ENSMUST00000175160 84 ntBASIC16.22■□□□□ 0.19
Trim50Q810I2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms