Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vrk1Q80X41 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vrk1Q80X41 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vrk1Q80X41 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.89■□□□□ 0.13
Vrk1Q80X41 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.89■□□□□ 0.13
Vrk1Q80X41 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.89■□□□□ 0.13
Vrk1Q80X41 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.89■□□□□ 0.13
Vrk1Q80X41 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.89■□□□□ 0.13
Vrk1Q80X41 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.89■□□□□ 0.13
Vrk1Q80X41 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vrk1Q80X41 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
Vrk1Q80X41 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Vrk1Q80X41 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vrk1Q80X41 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vrk1Q80X41 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vrk1Q80X41 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vrk1Q80X41 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vrk1Q80X41 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.89■□□□□ 0.13
Vrk1Q80X41 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vrk1Q80X41 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vrk1Q80X41 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vrk1Q80X41 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Vrk1Q80X41 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vrk1Q80X41 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Vrk1Q80X41 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.88■□□□□ 0.13
Vrk1Q80X41 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.88■□□□□ 0.13
Vrk1Q80X41 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vrk1Q80X41 Gm43347-201ENSMUST00000200226 580 ntBASIC15.88■□□□□ 0.13
Vrk1Q80X41 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vrk1Q80X41 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.88■□□□□ 0.13
Vrk1Q80X41 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vrk1Q80X41 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Vrk1Q80X41 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vrk1Q80X41 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vrk1Q80X41 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vrk1Q80X41 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vrk1Q80X41 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.88■□□□□ 0.13
Vrk1Q80X41 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vrk1Q80X41 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vrk1Q80X41 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vrk1Q80X41 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vrk1Q80X41 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vrk1Q80X41 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vrk1Q80X41 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vrk1Q80X41 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vrk1Q80X41 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vrk1Q80X41 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vrk1Q80X41 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vrk1Q80X41 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Vrk1Q80X41 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vrk1Q80X41 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Vrk1Q80X41 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vrk1Q80X41 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vrk1Q80X41 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Vrk1Q80X41 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vrk1Q80X41 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.87■□□□□ 0.13
Vrk1Q80X41 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vrk1Q80X41 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Vrk1Q80X41 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.87■□□□□ 0.13
Vrk1Q80X41 Gm5864-201ENSMUST00000202263 970 ntBASIC15.87■□□□□ 0.13
Vrk1Q80X41 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vrk1Q80X41 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vrk1Q80X41 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vrk1Q80X41 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vrk1Q80X41 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.87■□□□□ 0.13
Vrk1Q80X41 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vrk1Q80X41 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.87■□□□□ 0.13
Vrk1Q80X41 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vrk1Q80X41 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vrk1Q80X41 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vrk1Q80X41 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vrk1Q80X41 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vrk1Q80X41 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vrk1Q80X41 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.86■□□□□ 0.13
Vrk1Q80X41 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vrk1Q80X41 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vrk1Q80X41 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vrk1Q80X41 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vrk1Q80X41 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vrk1Q80X41 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vrk1Q80X41 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vrk1Q80X41 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vrk1Q80X41 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vrk1Q80X41 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.86■□□□□ 0.13
Vrk1Q80X41 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vrk1Q80X41 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.85■□□□□ 0.13
Vrk1Q80X41 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vrk1Q80X41 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vrk1Q80X41 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vrk1Q80X41 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vrk1Q80X41 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Vrk1Q80X41 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vrk1Q80X41 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vrk1Q80X41 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vrk1Q80X41 Mir8098-201ENSMUST00000184011 137 ntBASIC15.85■□□□□ 0.13
Vrk1Q80X41 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Vrk1Q80X41 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.85■□□□□ 0.13
Vrk1Q80X41 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.85■□□□□ 0.13
Vrk1Q80X41 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vrk1Q80X41 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms