Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf40bQ80W14 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf40bQ80W14 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Prpf40bQ80W14 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Prpf40bQ80W14 Gm15794-201ENSMUST00000120182 631 ntBASIC19.22■□□□□ 0.67
Prpf40bQ80W14 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Prpf40bQ80W14 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf40bQ80W14 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf40bQ80W14 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf40bQ80W14 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf40bQ80W14 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf40bQ80W14 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf40bQ80W14 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf40bQ80W14 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf40bQ80W14 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf40bQ80W14 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf40bQ80W14 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf40bQ80W14 Gm10418-201ENSMUST00000100943 576 ntBASIC19.21■□□□□ 0.67
Prpf40bQ80W14 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf40bQ80W14 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf40bQ80W14 Gm10052-201ENSMUST00000168019 960 ntBASIC19.21■□□□□ 0.67
Prpf40bQ80W14 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf40bQ80W14 Gm7729-201ENSMUST00000050143 801 ntBASIC19.21■□□□□ 0.67
Prpf40bQ80W14 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf40bQ80W14 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.21■□□□□ 0.67
Prpf40bQ80W14 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf40bQ80W14 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Prpf40bQ80W14 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf40bQ80W14 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf40bQ80W14 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf40bQ80W14 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf40bQ80W14 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf40bQ80W14 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf40bQ80W14 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf40bQ80W14 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf40bQ80W14 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Prpf40bQ80W14 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf40bQ80W14 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.2■□□□□ 0.66
Prpf40bQ80W14 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf40bQ80W14 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.2■□□□□ 0.66
Prpf40bQ80W14 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC19.2■□□□□ 0.66
Prpf40bQ80W14 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.2■□□□□ 0.66
Prpf40bQ80W14 Gm29791-202ENSMUST00000207888 369 ntBASIC19.2■□□□□ 0.66
Prpf40bQ80W14 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf40bQ80W14 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Prpf40bQ80W14 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf40bQ80W14 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf40bQ80W14 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.2■□□□□ 0.66
Prpf40bQ80W14 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf40bQ80W14 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf40bQ80W14 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf40bQ80W14 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf40bQ80W14 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf40bQ80W14 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf40bQ80W14 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf40bQ80W14 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf40bQ80W14 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf40bQ80W14 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf40bQ80W14 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.19■□□□□ 0.66
Prpf40bQ80W14 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.19■□□□□ 0.66
Prpf40bQ80W14 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf40bQ80W14 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf40bQ80W14 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf40bQ80W14 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Prpf40bQ80W14 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf40bQ80W14 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.19■□□□□ 0.66
Prpf40bQ80W14 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf40bQ80W14 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf40bQ80W14 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.18■□□□□ 0.66
Prpf40bQ80W14 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.18■□□□□ 0.66
Prpf40bQ80W14 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf40bQ80W14 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf40bQ80W14 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.18■□□□□ 0.66
Prpf40bQ80W14 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.18■□□□□ 0.66
Prpf40bQ80W14 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf40bQ80W14 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Prpf40bQ80W14 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.18■□□□□ 0.66
Prpf40bQ80W14 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf40bQ80W14 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Prpf40bQ80W14 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf40bQ80W14 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf40bQ80W14 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf40bQ80W14 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf40bQ80W14 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf40bQ80W14 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf40bQ80W14 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Prpf40bQ80W14 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Prpf40bQ80W14 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.17■□□□□ 0.66
Prpf40bQ80W14 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.17■□□□□ 0.66
Prpf40bQ80W14 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC19.17■□□□□ 0.66
Prpf40bQ80W14 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf40bQ80W14 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf40bQ80W14 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.16■□□□□ 0.66
Prpf40bQ80W14 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf40bQ80W14 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf40bQ80W14 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf40bQ80W14 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Prpf40bQ80W14 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.16■□□□□ 0.66
Prpf40bQ80W14 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf40bQ80W14 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms