Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpp38Q80UU2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rpp38Q80UU2 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpp38Q80UU2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rpp38Q80UU2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.66■□□□□ 0.26
Rpp38Q80UU2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.66■□□□□ 0.26
Rpp38Q80UU2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpp38Q80UU2 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rpp38Q80UU2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.66■□□□□ 0.26
Rpp38Q80UU2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpp38Q80UU2 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpp38Q80UU2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpp38Q80UU2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rpp38Q80UU2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpp38Q80UU2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpp38Q80UU2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rpp38Q80UU2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpp38Q80UU2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rpp38Q80UU2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpp38Q80UU2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rpp38Q80UU2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpp38Q80UU2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.65■□□□□ 0.26
Rpp38Q80UU2 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpp38Q80UU2 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rpp38Q80UU2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpp38Q80UU2 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Rpp38Q80UU2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpp38Q80UU2 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rpp38Q80UU2 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpp38Q80UU2 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Rpp38Q80UU2 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpp38Q80UU2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpp38Q80UU2 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.65■□□□□ 0.26
Rpp38Q80UU2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Rpp38Q80UU2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpp38Q80UU2 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpp38Q80UU2 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rpp38Q80UU2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rpp38Q80UU2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpp38Q80UU2 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpp38Q80UU2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpp38Q80UU2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpp38Q80UU2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpp38Q80UU2 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpp38Q80UU2 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.64■□□□□ 0.25
Rpp38Q80UU2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpp38Q80UU2 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rpp38Q80UU2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpp38Q80UU2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpp38Q80UU2 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rpp38Q80UU2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.64■□□□□ 0.25
Rpp38Q80UU2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rpp38Q80UU2 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Rpp38Q80UU2 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Rpp38Q80UU2 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.64■□□□□ 0.25
Rpp38Q80UU2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpp38Q80UU2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpp38Q80UU2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rpp38Q80UU2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rpp38Q80UU2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Rpp38Q80UU2 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Rpp38Q80UU2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rpp38Q80UU2 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpp38Q80UU2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpp38Q80UU2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpp38Q80UU2 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rpp38Q80UU2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpp38Q80UU2 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpp38Q80UU2 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Rpp38Q80UU2 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpp38Q80UU2 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.63■□□□□ 0.25
Rpp38Q80UU2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.63■□□□□ 0.25
Rpp38Q80UU2 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rpp38Q80UU2 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpp38Q80UU2 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rpp38Q80UU2 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
Rpp38Q80UU2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpp38Q80UU2 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpp38Q80UU2 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpp38Q80UU2 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.63■□□□□ 0.25
Rpp38Q80UU2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rpp38Q80UU2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpp38Q80UU2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpp38Q80UU2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpp38Q80UU2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpp38Q80UU2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Rpp38Q80UU2 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpp38Q80UU2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpp38Q80UU2 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpp38Q80UU2 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpp38Q80UU2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpp38Q80UU2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpp38Q80UU2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.62■□□□□ 0.25
Rpp38Q80UU2 Gm11355-201ENSMUST00000121120 306 ntBASIC16.62■□□□□ 0.25
Rpp38Q80UU2 Gm37722-201ENSMUST00000193757 208 ntBASIC16.62■□□□□ 0.25
Rpp38Q80UU2 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpp38Q80UU2 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpp38Q80UU2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpp38Q80UU2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.62■□□□□ 0.25
Rpp38Q80UU2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms