Protein–RNA interactions for Protein: Q80T79

Csmd3, CUB and sushi domain-containing protein 3, mousemouse

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csmd3Q80T79 Gm15442-201ENSMUST00000117905 1527 ntBASIC11.38□□□□□ -0.59
Csmd3Q80T79 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Csmd3Q80T79 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Csmd3Q80T79 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Csmd3Q80T79 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Csmd3Q80T79 Gm6184-201ENSMUST00000120403 1261 ntBASIC11.38□□□□□ -0.59
Csmd3Q80T79 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.38□□□□□ -0.59
Csmd3Q80T79 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Csmd3Q80T79 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Csmd3Q80T79 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Csmd3Q80T79 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Csmd3Q80T79 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC11.38□□□□□ -0.59
Csmd3Q80T79 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Csmd3Q80T79 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC11.38□□□□□ -0.59
Csmd3Q80T79 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Csmd3Q80T79 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC11.38□□□□□ -0.59
Csmd3Q80T79 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.38□□□□□ -0.59
Csmd3Q80T79 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Csmd3Q80T79 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Csmd3Q80T79 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Csmd3Q80T79 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Csmd3Q80T79 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Csmd3Q80T79 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Csmd3Q80T79 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Csmd3Q80T79 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Csmd3Q80T79 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Csmd3Q80T79 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Csmd3Q80T79 Gm6627-201ENSMUST00000218299 2386 ntBASIC11.38□□□□□ -0.59
Csmd3Q80T79 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Csmd3Q80T79 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Csmd3Q80T79 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC11.38□□□□□ -0.59
Csmd3Q80T79 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Csmd3Q80T79 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Csmd3Q80T79 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Csmd3Q80T79 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Csmd3Q80T79 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Csmd3Q80T79 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Csmd3Q80T79 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Csmd3Q80T79 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Csmd3Q80T79 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Csmd3Q80T79 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Csmd3Q80T79 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Csmd3Q80T79 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Csmd3Q80T79 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Csmd3Q80T79 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.37□□□□□ -0.59
Csmd3Q80T79 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Csmd3Q80T79 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Csmd3Q80T79 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Csmd3Q80T79 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Csmd3Q80T79 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Csmd3Q80T79 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC11.37□□□□□ -0.59
Csmd3Q80T79 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Csmd3Q80T79 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC11.37□□□□□ -0.59
Csmd3Q80T79 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Csmd3Q80T79 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Csmd3Q80T79 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Csmd3Q80T79 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Csmd3Q80T79 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC11.36□□□□□ -0.59
Csmd3Q80T79 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Csmd3Q80T79 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC11.36□□□□□ -0.59
Csmd3Q80T79 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Csmd3Q80T79 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC11.36□□□□□ -0.59
Csmd3Q80T79 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Csmd3Q80T79 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Csmd3Q80T79 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Csmd3Q80T79 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Csmd3Q80T79 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Csmd3Q80T79 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Csmd3Q80T79 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Csmd3Q80T79 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Csmd3Q80T79 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC11.36□□□□□ -0.59
Csmd3Q80T79 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Csmd3Q80T79 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Csmd3Q80T79 Tfap2a-209ENSMUST00000225180 1828 ntBASIC11.36□□□□□ -0.59
Csmd3Q80T79 Gfra2-202ENSMUST00000227633 1480 ntBASIC11.36□□□□□ -0.59
Csmd3Q80T79 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Csmd3Q80T79 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Csmd3Q80T79 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Csmd3Q80T79 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Csmd3Q80T79 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Csmd3Q80T79 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Csmd3Q80T79 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Csmd3Q80T79 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC11.36□□□□□ -0.59
Csmd3Q80T79 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Csmd3Q80T79 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC11.36□□□□□ -0.59
Csmd3Q80T79 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Csmd3Q80T79 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Csmd3Q80T79 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Csmd3Q80T79 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Csmd3Q80T79 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Csmd3Q80T79 Gm27646-201ENSMUST00000183989 110 ntBASIC11.35□□□□□ -0.59
Csmd3Q80T79 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC11.35□□□□□ -0.59
Csmd3Q80T79 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Csmd3Q80T79 Gm8396-201ENSMUST00000057361 823 ntBASIC11.35□□□□□ -0.59
Csmd3Q80T79 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Csmd3Q80T79 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Csmd3Q80T79 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Csmd3Q80T79 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Csmd3Q80T79 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Csmd3Q80T79 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms