Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ush1gQ80T11 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ush1gQ80T11 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ush1gQ80T11 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ush1gQ80T11 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ush1gQ80T11 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ush1gQ80T11 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ush1gQ80T11 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ush1gQ80T11 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ush1gQ80T11 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ush1gQ80T11 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Ush1gQ80T11 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ush1gQ80T11 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Ush1gQ80T11 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ush1gQ80T11 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ush1gQ80T11 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.21■□□□□ 0.51
Ush1gQ80T11 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ush1gQ80T11 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ush1gQ80T11 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ush1gQ80T11 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.21■□□□□ 0.5
Ush1gQ80T11 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ush1gQ80T11 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ush1gQ80T11 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ush1gQ80T11 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ush1gQ80T11 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ush1gQ80T11 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ush1gQ80T11 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ush1gQ80T11 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ush1gQ80T11 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.2■□□□□ 0.5
Ush1gQ80T11 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ush1gQ80T11 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ush1gQ80T11 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Ush1gQ80T11 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ush1gQ80T11 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Ush1gQ80T11 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ush1gQ80T11 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ush1gQ80T11 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.19■□□□□ 0.5
Ush1gQ80T11 Gm13884-201ENSMUST00000118103 829 ntBASIC18.19■□□□□ 0.5
Ush1gQ80T11 Gm12895-201ENSMUST00000122214 226 ntBASIC18.19■□□□□ 0.5
Ush1gQ80T11 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.19■□□□□ 0.5
Ush1gQ80T11 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.19■□□□□ 0.5
Ush1gQ80T11 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ush1gQ80T11 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ush1gQ80T11 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ush1gQ80T11 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ush1gQ80T11 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Ush1gQ80T11 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ush1gQ80T11 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ush1gQ80T11 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ush1gQ80T11 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ush1gQ80T11 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ush1gQ80T11 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ush1gQ80T11 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Ush1gQ80T11 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.18■□□□□ 0.5
Ush1gQ80T11 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ush1gQ80T11 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.18■□□□□ 0.5
Ush1gQ80T11 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.18■□□□□ 0.5
Ush1gQ80T11 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.18■□□□□ 0.5
Ush1gQ80T11 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ush1gQ80T11 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ush1gQ80T11 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ush1gQ80T11 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ush1gQ80T11 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ush1gQ80T11 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ush1gQ80T11 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ush1gQ80T11 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ush1gQ80T11 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ush1gQ80T11 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Ush1gQ80T11 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ush1gQ80T11 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ush1gQ80T11 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ush1gQ80T11 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ush1gQ80T11 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ush1gQ80T11 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ush1gQ80T11 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.17■□□□□ 0.5
Ush1gQ80T11 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ush1gQ80T11 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.17■□□□□ 0.5
Ush1gQ80T11 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ush1gQ80T11 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ush1gQ80T11 Gm5867-201ENSMUST00000063197 592 ntBASIC18.17■□□□□ 0.5
Ush1gQ80T11 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Ush1gQ80T11 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ush1gQ80T11 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ush1gQ80T11 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ush1gQ80T11 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ush1gQ80T11 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ush1gQ80T11 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ush1gQ80T11 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ush1gQ80T11 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ush1gQ80T11 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ush1gQ80T11 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.16■□□□□ 0.5
Ush1gQ80T11 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ush1gQ80T11 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ush1gQ80T11 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.16■□□□□ 0.5
Ush1gQ80T11 Gm18195-201ENSMUST00000207604 706 ntBASIC18.16■□□□□ 0.5
Ush1gQ80T11 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.16■□□□□ 0.5
Ush1gQ80T11 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ush1gQ80T11 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ush1gQ80T11 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ush1gQ80T11 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms