Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.34■□□□□ 0.05
Exosc3Q7TQK4 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Exosc3Q7TQK4 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Exosc3Q7TQK4 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Exosc3Q7TQK4 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Exosc3Q7TQK4 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Exosc3Q7TQK4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Exosc3Q7TQK4 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Exosc3Q7TQK4 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.34■□□□□ 0.05
Exosc3Q7TQK4 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Exosc3Q7TQK4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Exosc3Q7TQK4 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Exosc3Q7TQK4 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.34■□□□□ 0.05
Exosc3Q7TQK4 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Exosc3Q7TQK4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Exosc3Q7TQK4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Exosc3Q7TQK4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.34■□□□□ 0.05
Exosc3Q7TQK4 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Exosc3Q7TQK4 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Exosc3Q7TQK4 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Exosc3Q7TQK4 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Exosc3Q7TQK4 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Exosc3Q7TQK4 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.34■□□□□ 0.05
Exosc3Q7TQK4 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Exosc3Q7TQK4 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.33■□□□□ 0.05
Exosc3Q7TQK4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Exosc3Q7TQK4 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Exosc3Q7TQK4 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Exosc3Q7TQK4 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Exosc3Q7TQK4 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Exosc3Q7TQK4 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Exosc3Q7TQK4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Exosc3Q7TQK4 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Exosc3Q7TQK4 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
Exosc3Q7TQK4 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
Exosc3Q7TQK4 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Exosc3Q7TQK4 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Exosc3Q7TQK4 Gm11336-201ENSMUST00000118168 334 ntBASIC15.33■□□□□ 0.04
Exosc3Q7TQK4 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.33■□□□□ 0.04
Exosc3Q7TQK4 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Exosc3Q7TQK4 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Exosc3Q7TQK4 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Exosc3Q7TQK4 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.33■□□□□ 0.04
Exosc3Q7TQK4 Gm44450-201ENSMUST00000199528 114 ntBASIC15.33■□□□□ 0.04
Exosc3Q7TQK4 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.33■□□□□ 0.04
Exosc3Q7TQK4 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Exosc3Q7TQK4 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Exosc3Q7TQK4 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Exosc3Q7TQK4 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Exosc3Q7TQK4 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Exosc3Q7TQK4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Exosc3Q7TQK4 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Exosc3Q7TQK4 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.32■□□□□ 0.04
Exosc3Q7TQK4 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.32■□□□□ 0.04
Exosc3Q7TQK4 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.32■□□□□ 0.04
Exosc3Q7TQK4 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Exosc3Q7TQK4 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Exosc3Q7TQK4 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Exosc3Q7TQK4 Gm11355-201ENSMUST00000121120 306 ntBASIC15.32■□□□□ 0.04
Exosc3Q7TQK4 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Exosc3Q7TQK4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Exosc3Q7TQK4 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Exosc3Q7TQK4 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Exosc3Q7TQK4 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Exosc3Q7TQK4 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Exosc3Q7TQK4 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Exosc3Q7TQK4 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Exosc3Q7TQK4 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.32■□□□□ 0.04
Exosc3Q7TQK4 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Exosc3Q7TQK4 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.32■□□□□ 0.04
Exosc3Q7TQK4 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Exosc3Q7TQK4 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Exosc3Q7TQK4 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Exosc3Q7TQK4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Exosc3Q7TQK4 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Exosc3Q7TQK4 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Exosc3Q7TQK4 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Exosc3Q7TQK4 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Exosc3Q7TQK4 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Exosc3Q7TQK4 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Exosc3Q7TQK4 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Exosc3Q7TQK4 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Exosc3Q7TQK4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Exosc3Q7TQK4 Gm13216-201ENSMUST00000117145 591 ntBASIC15.31■□□□□ 0.04
Exosc3Q7TQK4 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.31■□□□□ 0.04
Exosc3Q7TQK4 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.31■□□□□ 0.04
Exosc3Q7TQK4 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Exosc3Q7TQK4 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Exosc3Q7TQK4 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Exosc3Q7TQK4 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Exosc3Q7TQK4 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Exosc3Q7TQK4 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Exosc3Q7TQK4 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Exosc3Q7TQK4 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Exosc3Q7TQK4 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Exosc3Q7TQK4 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Exosc3Q7TQK4 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Exosc3Q7TQK4 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Exosc3Q7TQK4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Exosc3Q7TQK4 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms