Protein–RNA interactions for Protein: Q7TNH6

Nphp3, Nephrocystin-3, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3Q7TNH6 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nphp3Q7TNH6 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nphp3Q7TNH6 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nphp3Q7TNH6 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nphp3Q7TNH6 Gm11841-201ENSMUST00000117060 1963 ntBASIC20.26■□□□□ 0.83
Nphp3Q7TNH6 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Nphp3Q7TNH6 Gm14859-201ENSMUST00000117752 357 ntBASIC20.26■□□□□ 0.83
Nphp3Q7TNH6 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nphp3Q7TNH6 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC20.26■□□□□ 0.83
Nphp3Q7TNH6 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC20.26■□□□□ 0.83
Nphp3Q7TNH6 Gm29707-201ENSMUST00000196325 491 ntBASIC20.26■□□□□ 0.83
Nphp3Q7TNH6 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.26■□□□□ 0.83
Nphp3Q7TNH6 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nphp3Q7TNH6 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nphp3Q7TNH6 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Nphp3Q7TNH6 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nphp3Q7TNH6 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Nphp3Q7TNH6 Zfp264-201ENSMUST00000208656 1563 ntBASIC20.25■□□□□ 0.83
Nphp3Q7TNH6 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
Nphp3Q7TNH6 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nphp3Q7TNH6 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nphp3Q7TNH6 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nphp3Q7TNH6 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nphp3Q7TNH6 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nphp3Q7TNH6 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nphp3Q7TNH6 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nphp3Q7TNH6 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nphp3Q7TNH6 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nphp3Q7TNH6 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC20.25■□□□□ 0.83
Nphp3Q7TNH6 Gfra2-202ENSMUST00000227633 1480 ntBASIC20.25■□□□□ 0.83
Nphp3Q7TNH6 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nphp3Q7TNH6 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC20.25■□□□□ 0.83
Nphp3Q7TNH6 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nphp3Q7TNH6 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nphp3Q7TNH6 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nphp3Q7TNH6 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nphp3Q7TNH6 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Nphp3Q7TNH6 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nphp3Q7TNH6 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nphp3Q7TNH6 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
Nphp3Q7TNH6 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nphp3Q7TNH6 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC20.24■□□□□ 0.83
Nphp3Q7TNH6 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nphp3Q7TNH6 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nphp3Q7TNH6 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nphp3Q7TNH6 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nphp3Q7TNH6 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nphp3Q7TNH6 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Nphp3Q7TNH6 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nphp3Q7TNH6 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Nphp3Q7TNH6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nphp3Q7TNH6 Gm15794-201ENSMUST00000120182 631 ntBASIC20.23■□□□□ 0.83
Nphp3Q7TNH6 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nphp3Q7TNH6 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nphp3Q7TNH6 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nphp3Q7TNH6 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Nphp3Q7TNH6 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nphp3Q7TNH6 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Nphp3Q7TNH6 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Nphp3Q7TNH6 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nphp3Q7TNH6 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nphp3Q7TNH6 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nphp3Q7TNH6 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nphp3Q7TNH6 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nphp3Q7TNH6 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nphp3Q7TNH6 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC20.22■□□□□ 0.83
Nphp3Q7TNH6 Gm45328-201ENSMUST00000210942 917 ntBASIC20.22■□□□□ 0.83
Nphp3Q7TNH6 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nphp3Q7TNH6 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nphp3Q7TNH6 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nphp3Q7TNH6 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nphp3Q7TNH6 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Nphp3Q7TNH6 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nphp3Q7TNH6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nphp3Q7TNH6 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nphp3Q7TNH6 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nphp3Q7TNH6 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC20.21■□□□□ 0.83
Nphp3Q7TNH6 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nphp3Q7TNH6 Gm13216-201ENSMUST00000117145 591 ntBASIC20.21■□□□□ 0.83
Nphp3Q7TNH6 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nphp3Q7TNH6 Gm27357-201ENSMUST00000183754 135 ntBASIC20.21■□□□□ 0.83
Nphp3Q7TNH6 Gm27742-201ENSMUST00000184667 60 ntBASIC20.21■□□□□ 0.83
Nphp3Q7TNH6 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nphp3Q7TNH6 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nphp3Q7TNH6 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Nphp3Q7TNH6 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nphp3Q7TNH6 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nphp3Q7TNH6 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.2■□□□□ 0.82
Nphp3Q7TNH6 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Nphp3Q7TNH6 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nphp3Q7TNH6 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nphp3Q7TNH6 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nphp3Q7TNH6 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.2■□□□□ 0.82
Nphp3Q7TNH6 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC20.2■□□□□ 0.82
Nphp3Q7TNH6 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nphp3Q7TNH6 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nphp3Q7TNH6 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Nphp3Q7TNH6 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nphp3Q7TNH6 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nphp3Q7TNH6 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms