Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.95■□□□□ 0.78
Npc1l1Q6T3U4 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Npc1l1Q6T3U4 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Npc1l1Q6T3U4 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.95■□□□□ 0.78
Npc1l1Q6T3U4 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Npc1l1Q6T3U4 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Npc1l1Q6T3U4 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.95■□□□□ 0.78
Npc1l1Q6T3U4 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Npc1l1Q6T3U4 Birc2-201ENSMUST00000054878 378 ntBASIC19.95■□□□□ 0.78
Npc1l1Q6T3U4 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Npc1l1Q6T3U4 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Npc1l1Q6T3U4 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Npc1l1Q6T3U4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Npc1l1Q6T3U4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.94■□□□□ 0.78
Npc1l1Q6T3U4 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Npc1l1Q6T3U4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Npc1l1Q6T3U4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Npc1l1Q6T3U4 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Npc1l1Q6T3U4 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Npc1l1Q6T3U4 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.94■□□□□ 0.78
Npc1l1Q6T3U4 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Npc1l1Q6T3U4 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Npc1l1Q6T3U4 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Npc1l1Q6T3U4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Npc1l1Q6T3U4 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Npc1l1Q6T3U4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.93■□□□□ 0.78
Npc1l1Q6T3U4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Npc1l1Q6T3U4 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Npc1l1Q6T3U4 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Npc1l1Q6T3U4 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Npc1l1Q6T3U4 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Npc1l1Q6T3U4 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Npc1l1Q6T3U4 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Npc1l1Q6T3U4 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Npc1l1Q6T3U4 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.93■□□□□ 0.78
Npc1l1Q6T3U4 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Npc1l1Q6T3U4 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.93■□□□□ 0.78
Npc1l1Q6T3U4 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Npc1l1Q6T3U4 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Npc1l1Q6T3U4 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Npc1l1Q6T3U4 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Npc1l1Q6T3U4 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Npc1l1Q6T3U4 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Npc1l1Q6T3U4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Npc1l1Q6T3U4 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Npc1l1Q6T3U4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Npc1l1Q6T3U4 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Npc1l1Q6T3U4 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Npc1l1Q6T3U4 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.92■□□□□ 0.78
Npc1l1Q6T3U4 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Npc1l1Q6T3U4 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Npc1l1Q6T3U4 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Npc1l1Q6T3U4 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Npc1l1Q6T3U4 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Npc1l1Q6T3U4 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Npc1l1Q6T3U4 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Npc1l1Q6T3U4 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Npc1l1Q6T3U4 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Npc1l1Q6T3U4 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Npc1l1Q6T3U4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Npc1l1Q6T3U4 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.92■□□□□ 0.78
Npc1l1Q6T3U4 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Npc1l1Q6T3U4 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Npc1l1Q6T3U4 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Npc1l1Q6T3U4 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Npc1l1Q6T3U4 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Npc1l1Q6T3U4 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Npc1l1Q6T3U4 Gm13216-201ENSMUST00000117145 591 ntBASIC19.91■□□□□ 0.78
Npc1l1Q6T3U4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Npc1l1Q6T3U4 AC164629.2-201ENSMUST00000217916 270 ntBASIC19.91■□□□□ 0.78
Npc1l1Q6T3U4 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Npc1l1Q6T3U4 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Npc1l1Q6T3U4 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Npc1l1Q6T3U4 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Npc1l1Q6T3U4 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Npc1l1Q6T3U4 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.91■□□□□ 0.78
Npc1l1Q6T3U4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.9■□□□□ 0.78
Npc1l1Q6T3U4 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.9■□□□□ 0.78
Npc1l1Q6T3U4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Npc1l1Q6T3U4 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Npc1l1Q6T3U4 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Npc1l1Q6T3U4 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Npc1l1Q6T3U4 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Npc1l1Q6T3U4 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.9■□□□□ 0.78
Npc1l1Q6T3U4 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.9■□□□□ 0.78
Npc1l1Q6T3U4 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Npc1l1Q6T3U4 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.9■□□□□ 0.78
Npc1l1Q6T3U4 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Npc1l1Q6T3U4 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Npc1l1Q6T3U4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Npc1l1Q6T3U4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Npc1l1Q6T3U4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Npc1l1Q6T3U4 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Npc1l1Q6T3U4 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Npc1l1Q6T3U4 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Npc1l1Q6T3U4 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Npc1l1Q6T3U4 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Npc1l1Q6T3U4 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Npc1l1Q6T3U4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Npc1l1Q6T3U4 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms