Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf220Q6PDX6 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf220Q6PDX6 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rnf220Q6PDX6 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf220Q6PDX6 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf220Q6PDX6 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf220Q6PDX6 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
Rnf220Q6PDX6 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Rnf220Q6PDX6 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Rnf220Q6PDX6 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf220Q6PDX6 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Rnf220Q6PDX6 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.85■□□□□ 0.13
Rnf220Q6PDX6 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf220Q6PDX6 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf220Q6PDX6 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.85■□□□□ 0.13
Rnf220Q6PDX6 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf220Q6PDX6 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf220Q6PDX6 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf220Q6PDX6 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.85■□□□□ 0.13
Rnf220Q6PDX6 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.85■□□□□ 0.13
Rnf220Q6PDX6 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf220Q6PDX6 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf220Q6PDX6 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf220Q6PDX6 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
Rnf220Q6PDX6 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.85■□□□□ 0.13
Rnf220Q6PDX6 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf220Q6PDX6 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf220Q6PDX6 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf220Q6PDX6 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf220Q6PDX6 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf220Q6PDX6 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf220Q6PDX6 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf220Q6PDX6 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.84■□□□□ 0.13
Rnf220Q6PDX6 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.84■□□□□ 0.13
Rnf220Q6PDX6 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.84■□□□□ 0.13
Rnf220Q6PDX6 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf220Q6PDX6 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf220Q6PDX6 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf220Q6PDX6 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.84■□□□□ 0.13
Rnf220Q6PDX6 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf220Q6PDX6 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf220Q6PDX6 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf220Q6PDX6 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf220Q6PDX6 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf220Q6PDX6 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf220Q6PDX6 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Rnf220Q6PDX6 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.84■□□□□ 0.13
Rnf220Q6PDX6 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Rnf220Q6PDX6 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.83■□□□□ 0.13
Rnf220Q6PDX6 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Rnf220Q6PDX6 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf220Q6PDX6 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf220Q6PDX6 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf220Q6PDX6 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf220Q6PDX6 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf220Q6PDX6 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf220Q6PDX6 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf220Q6PDX6 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.83■□□□□ 0.12
Rnf220Q6PDX6 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC15.83■□□□□ 0.12
Rnf220Q6PDX6 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.83■□□□□ 0.12
Rnf220Q6PDX6 Gm42642-201ENSMUST00000200683 355 ntBASIC15.83■□□□□ 0.12
Rnf220Q6PDX6 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.83■□□□□ 0.12
Rnf220Q6PDX6 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf220Q6PDX6 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf220Q6PDX6 Gm5874-201ENSMUST00000096101 508 ntBASIC15.83■□□□□ 0.12
Rnf220Q6PDX6 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf220Q6PDX6 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf220Q6PDX6 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Rnf220Q6PDX6 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf220Q6PDX6 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf220Q6PDX6 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf220Q6PDX6 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.83■□□□□ 0.12
Rnf220Q6PDX6 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.83■□□□□ 0.12
Rnf220Q6PDX6 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf220Q6PDX6 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.82■□□□□ 0.12
Rnf220Q6PDX6 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf220Q6PDX6 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf220Q6PDX6 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf220Q6PDX6 AV356131-201ENSMUST00000206201 750 ntBASIC15.82■□□□□ 0.12
Rnf220Q6PDX6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
Rnf220Q6PDX6 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf220Q6PDX6 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC15.82■□□□□ 0.12
Rnf220Q6PDX6 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf220Q6PDX6 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf220Q6PDX6 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Rnf220Q6PDX6 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf220Q6PDX6 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf220Q6PDX6 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf220Q6PDX6 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf220Q6PDX6 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf220Q6PDX6 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Rnf220Q6PDX6 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf220Q6PDX6 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf220Q6PDX6 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Rnf220Q6PDX6 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf220Q6PDX6 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Rnf220Q6PDX6 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Rnf220Q6PDX6 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf220Q6PDX6 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf220Q6PDX6 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms